Ttri007278.1
Basic Information
- Insect
- Tinea trinotella
- Gene Symbol
- bab1
- Assembly
- GCA_905220615.1
- Location
- HG992305.1:11791023-11797662[-]
Transcription Factor Domain
- TF Family
- HTH
- Domain
- HTH_psq domain
- PFAM
- PF05225
- TF Group
- Helix-turn-helix
- Description
- This DNA-binding motif is found in four copies in the pipsqueak protein of Drosophila melanogaster [1]. In pipsqueak this domain binds to GAGA sequence [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 2 1.1e-17 1.3e-14 53.9 0.0 1 43 64 107 64 109 0.95 2 2 3.8 4.3e+03 -2.2 0.3 22 23 198 199 182 209 0.57
Sequence Information
- Coding Sequence
- ATGCTCCATTATAAGATAAGGGCCAAGCTTCTGGAGAACTCGCACGCCTGGCTGAGCCCATCCACTTCGTCAATAGCAGCAGACAGTTACCAGTATCAGTTGCAATCAATGTGGCAGAAGTGCTGGAATACAAACCAAAGCTTGGTTCAAAATCTTCGCTTCAGAGAGAGAGGACCTTTAAAATCTTGGAGGCCAGAAACAATGGCCGAAGCTATATTCTCCGTGTTGAAAGAAGGATTGTCTCTGTCACAAGCTGCACGCAAATACGACATTCCATATCCGACTTTCGTGCTGTATGCAAACAGAGTCCACAATATGCTGGGTCCCAGTGCTGATGGAGGCGCAGATTTGAGACCGAAGGGCCGAGGAAGGCCGCAACGCATTCTGCTGGGTGTATGGCCAGACGATCATATAAGGGGAGTGATCAGAGCCGTTGTTTTTCGCGACACACACACACCGCACACTCCTCACATCAAGGAAGAGCCAATGCCAGTGTACTCCGCGTTAACGGATGGTATAGGAGTGCAGGCAGCTTATACAGGGGTAGCTGCTTGCAGCAATGGCCGCGAGGGAGGTGTGTCTCCGAATGCTGCAGCTGCCGCCGCTGTAGTTGCCGTCGCGCATGGACTTCGTCGTCAGATGTGCAATATGGTGGTTGCCGCACAACGCCCTGTGGATCATCCCGGGCACCTTGCGATGCCGCAACTACCCATGCATTCACCGCGGCTACCATCACCACTTTCCACCGGCCTCGAGTCTCCGCTCTGCTCTCCACCGCCACCTGGTCATGCTCTCGAACCACCGAAACCGAACGATCCTTTCCGCCCATTTATATCGCCACGCCCGGATAGTCGCTATGGAACAGATCGAGATATGTCTGATATTCCCGAAATGGGACCACCGAAGACACCAATCGCAATGATTTCCAAAAATGGAAAAGATCAGCTTTCGACGCCGGTCTCAGTTAAGATGGAGCTACCTCACCCGGAGGCTCGTGCGGAGAACATCTGA
- Protein Sequence
- MLHYKIRAKLLENSHAWLSPSTSSIAADSYQYQLQSMWQKCWNTNQSLVQNLRFRERGPLKSWRPETMAEAIFSVLKEGLSLSQAARKYDIPYPTFVLYANRVHNMLGPSADGGADLRPKGRGRPQRILLGVWPDDHIRGVIRAVVFRDTHTPHTPHIKEEPMPVYSALTDGIGVQAAYTGVAACSNGREGGVSPNAAAAAAVVAVAHGLRRQMCNMVVAAQRPVDHPGHLAMPQLPMHSPRLPSPLSTGLESPLCSPPPPGHALEPPKPNDPFRPFISPRPDSRYGTDRDMSDIPEMGPPKTPIAMISKNGKDQLSTPVSVKMELPHPEARAENI
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_01281233;
- 90% Identity
- iTF_01016520;
- 80% Identity
- -