Acap000520.1
Basic Information
- Insect
- Asbolis capucinus
- Gene Symbol
- bab1
- Assembly
- GCA_018249125.1
- Location
- DWJZ01000137.1:29993-33121[-]
Transcription Factor Domain
- TF Family
- HTH
- Domain
- HTH_psq domain
- PFAM
- PF05225
- TF Group
- Helix-turn-helix
- Description
- This DNA-binding motif is found in four copies in the pipsqueak protein of Drosophila melanogaster [1]. In pipsqueak this domain binds to GAGA sequence [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 2 9.1e-18 1.6e-14 54.0 0.0 1 43 48 91 48 93 0.95 2 2 2.2 3.8e+03 -1.6 1.4 6 15 182 191 178 194 0.81
Sequence Information
- Coding Sequence
- ATGTGCTCATACTGTTTTCTTGTATTTTCAGCAGATAGCTACCAGTACCAACTGCAGTCGATGTGGCAGAAGTGCTGGAACACCAACCAGAGTCTGGTTCACAACCTGCGGTTCCGCGAACGTGGGCCTCTGAAGTCGTGGCGCCCGGAGACCATGGCCGAGGCCATCTTCTCCGTGTTGAAGGAAGGCCTCTCGCTGTCCCAGGCCGCGAGGAAGTACGACATCCCATACCCGACATTCGTGCTGTACGCCAATCGAGTCCACAACATGCTGGGACCTAGCGCTGATGGAGGAGCAGATCTGAGGCCGAAGGGTCGCGGGCGGCCGCAGCGCATCCTGCTGGGCGTCTGGCCGGACGAGCACATCCGCGGCGTCATTCGCGCCGTCGTCTTCCGCGACACGCACGCCCACACGCCGCACCACATCAAGGAGGAGGTGCTGCCATATCCCTCGATCACGGACGGGCTGACGGTCGGCAACGCCTACGGGCCAGTGGCCTGCGGCAACGGGCGTGAGGGCGGAGTGTCGCCGaacgcggcggcggcggctgctGTGGCAGCCGTGGCACACGGCATCCGGCGACAAATGTGCAATATGGTGGTGGCAGCGCAGCGCCCACCCGACCACCCGCCGCACCTGGGCCTGCCGCCGCTGCCGCTGCAGTCGCCCCGGCTGCCCTCGCCGCTCTCCGCCGGCCTCGAGTCCCCGCTATGCTCGCCTCCGCCGCCCGGACACGCGCTCGAACCCCCCAAGCCCACCGACCCCTTCCGCCCCTTCGCCTCCCCTCGCCCAGGATACGGCGAACGCGACGTCGTTGCAGAGATCACGGATATGGGACCGCCCAAGACGCCCGTCGGAAAGAACGGCAAGGACATGTCCGCCGCAATGCCGGTGAAGATGGAGCTGCCCGGGGAGGCCCGTGCGGAGAACATCTGA
- Protein Sequence
- MCSYCFLVFSADSYQYQLQSMWQKCWNTNQSLVHNLRFRERGPLKSWRPETMAEAIFSVLKEGLSLSQAARKYDIPYPTFVLYANRVHNMLGPSADGGADLRPKGRGRPQRILLGVWPDEHIRGVIRAVVFRDTHAHTPHHIKEEVLPYPSITDGLTVGNAYGPVACGNGREGGVSPNAAAAAAVAAVAHGIRRQMCNMVVAAQRPPDHPPHLGLPPLPLQSPRLPSPLSAGLESPLCSPPPPGHALEPPKPTDPFRPFASPRPGYGERDVVAEITDMGPPKTPVGKNGKDMSAAMPVKMELPGEARAENI
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_01281233;
- 90% Identity
- iTF_01080655;
- 80% Identity
- -