Ehec018825.2
Basic Information
- Insect
- Eurema hecabe
- Gene Symbol
- bab1
- Assembly
- GCA_026213755.1
- Location
- JADANM010005835.1:5097500-5102886[-]
Transcription Factor Domain
- TF Family
- HTH
- Domain
- HTH_psq domain
- PFAM
- PF05225
- TF Group
- Helix-turn-helix
- Description
- This DNA-binding motif is found in four copies in the pipsqueak protein of Drosophila melanogaster [1]. In pipsqueak this domain binds to GAGA sequence [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 2 2e-17 1.5e-14 53.9 0.0 1 43 69 112 69 114 0.95 2 2 8.3 6e+03 -2.5 2.0 6 15 205 214 201 215 0.82
Sequence Information
- Coding Sequence
- ATGAAGCAAGAGATCGCTGAAAGCAGTTCAAGACCGGCAAAGATACTTGAAAATTCACACGCATGGCTGGGAGCCTCCACGTCTTCTCTGGCAGTAGATAGCTACCAGTACCAGCTGCAATCGATGTGGCAGAAATGTTGGAACACCAATCAGAGTCTCGTCCACAATCTGCGGTTCCGTGAACGCGGCCCGCTCAAGTCCTGGCGACCGGAGACCATGGCTGAGGCGATCTTCTCAGTCCTGAAGGAAGGCCTCTCCCTCTCACAAGCTGCACGGAAATACGACATACCATACCCGACGTTTGTTCTCTACGCGAATCGAGTCCACAATATGCTGGGACCCAGTGCTGACGGCGGTACAGATTTGAGGCCGAAGGGCCGGGGTCGACCACAGCGCATCTTGCTCGGCGTGTGGCCCGACGACCACATCCGAGGCGTGATCCGCGCAGTGGTCTTCCGCGACTCGCAAGCCTCGCACGCCGCTCACCACATTAAAGAGGAGGTGCTCCCGGTCTATCCGCAGATCACGGATGTAATGACGGTGGGCCAAAGTCCGTACCCGGTGCCGTGCGGCAACGGGCGTGAAGGGGGCGTCTCGCCGAACGCAGCCGCCGCTGCCGCCGTGGCCGCCGTGGCCCACGGGCTGCGCCGGCAGATGTGCAACATGGTGGTGGCTGCGCAGAGACCGCCCGACCACCCGCCGCACCTGGGCCTGCCGCCGCTGCCGCTGCAGTCGCCGCGCTTGCCCTCACCCCTGTCCACCGGCTTGGAGTCGCCTCTGTGCTCCCCCCCGCCCCCGGGCCACGCTCTAGAACCGCCGAAGCCCTCTGACCCGTTCCACCCATTCGTGTCGCCGCGACCTGACAGTCGCTACGGCGAGCGCGACGTCGTCGCCGAGATCACCGAGATGGGGCCGCCGAAGACCCCGGTGTCGATGGCTAAGAACGGCAAGGAGCACGCGTCGCCGGTGAAGATGGAGTCGCCGCAGGCGGAGGCGCGCGCGGAGAACATCTGA
- Protein Sequence
- MKQEIAESSSRPAKILENSHAWLGASTSSLAVDSYQYQLQSMWQKCWNTNQSLVHNLRFRERGPLKSWRPETMAEAIFSVLKEGLSLSQAARKYDIPYPTFVLYANRVHNMLGPSADGGTDLRPKGRGRPQRILLGVWPDDHIRGVIRAVVFRDSQASHAAHHIKEEVLPVYPQITDVMTVGQSPYPVPCGNGREGGVSPNAAAAAAVAAVAHGLRRQMCNMVVAAQRPPDHPPHLGLPPLPLQSPRLPSPLSTGLESPLCSPPPPGHALEPPKPSDPFHPFVSPRPDSRYGERDVVAEITEMGPPKTPVSMAKNGKEHASPVKMESPQAEARAENI
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_01281233;
- 90% Identity
- iTF_01080655;
- 80% Identity
- -