Tacr001180.2
Basic Information
- Insect
- Tachystola acroxantha
- Gene Symbol
- bab1
- Assembly
- GCA_963506565.1
- Location
- OY735870.1:17455987-17466690[-]
Transcription Factor Domain
- TF Family
- HTH
- Domain
- HTH_psq domain
- PFAM
- PF05225
- TF Group
- Helix-turn-helix
- Description
- This DNA-binding motif is found in four copies in the pipsqueak protein of Drosophila melanogaster [1]. In pipsqueak this domain binds to GAGA sequence [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 1 2.6e-17 1.6e-14 53.9 0.0 1 43 64 107 64 109 0.95
Sequence Information
- Coding Sequence
- ATGTGCAATTGTAAATTTCCTGCAAAATTGCTAGAGAATTCTCACGCTTGGCTGGGAGCATCGACATCGTCTATTGCAGCAGACAGCTACCAGTACCAACTTCAGTCGATGTGGCAGAAGTGCTGGAACACTAACCAAAGCCTCGTCCACAACCTGCGATTCCGTGAGCGCGGACCTCTCAAGTCCTGGAGGCCGGAGACCATGGCCGAAGCAATCTTCTCCGTCCTGAAGGAGGGCCTGTCTCTGTCTCAAGCTGCCAGGAAGTACGACATCCCGTACCCGACGTTCGTGTTGTATGCCAACCGGGTCCATAACATGCTCGGACCCAGCGCTGATGGCGGAGCAGATTTGCGCCCTAAGGGTCGCGGCCGGCCGCAGCGCATTCTGCTGGGCGTGTGGCCCGACGAGCACATCCGCGGCGTCATCCGCGCTGTCGTGTTCCGCGACACGCACACGCCTCACAACACGCACCACATCAAGGAGGAAGTGCTTCCAGTATACCCCTCCATCACGGACGGCATGACTGCCGTGCCGAGCCCGTACGGCGCCGTGGCGTGCGGCAACGGGCGCGAGGGCGGCGTGTCGCCCAAcgccgcggccgccgccgccgtggccGCCGTCGCGCACGGCCTGCGCCGCCAGATGTGCAACATGGTGGTCGCTGCGCAGCGGCCCCAGGACCACCCGCCGCACCTAGGCCTGCCGCCGCTGCCGCTGCAGTCGCCGCGCATGCCCTCGCCGCTGTCCGCCGGGCTCGAGTCGCCGCTgtgctcgccgccgccgccgggccaCGCGCTAGAGCCCGCCAAGCCGGCGGACCCGTTCCGCCCGTTCGCGTCCCCGCGCCCCGATAGCCGCTACAGCGAGCGCGACATCGTCGCCGAGATGACCGACATGGGCCCGCCCAAGACACCGGTGGCCATTGCTAAGAACGGCAAGGACCCGCTCTCGACACCGCTGCCGGTGAAGATGGAGCCGCCGCCCGCCGAGGCGCGCGCAGAGAACATCTGA
- Protein Sequence
- MCNCKFPAKLLENSHAWLGASTSSIAADSYQYQLQSMWQKCWNTNQSLVHNLRFRERGPLKSWRPETMAEAIFSVLKEGLSLSQAARKYDIPYPTFVLYANRVHNMLGPSADGGADLRPKGRGRPQRILLGVWPDEHIRGVIRAVVFRDTHTPHNTHHIKEEVLPVYPSITDGMTAVPSPYGAVACGNGREGGVSPNAAAAAAVAAVAHGLRRQMCNMVVAAQRPQDHPPHLGLPPLPLQSPRMPSPLSAGLESPLCSPPPPGHALEPAKPADPFRPFASPRPDSRYSERDIVAEMTDMGPPKTPVAIAKNGKDPLSTPLPVKMEPPPAEARAENI
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_01281233;
- 90% Identity
- iTF_01080655;
- 80% Identity
- -