Efla021027.1
Basic Information
- Insect
- Endotricha flammealis
- Gene Symbol
- bab1_1
- Assembly
- GCA_905163395.1
- Location
- LR990852.1:21365637-21369758[-]
Transcription Factor Domain
- TF Family
- HTH
- Domain
- HTH_psq domain
- PFAM
- PF05225
- TF Group
- Helix-turn-helix
- Description
- This DNA-binding motif is found in four copies in the pipsqueak protein of Drosophila melanogaster [1]. In pipsqueak this domain binds to GAGA sequence [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 2 1.6e-17 1.8e-14 54.0 0.0 1 43 45 88 45 90 0.95 2 2 4.6 5.4e+03 -1.9 1.6 6 15 182 191 178 193 0.83
Sequence Information
- Coding Sequence
- ATGCTATTCTATCTATTTTCAGCAGACAGCTACCAGTACCAACTTCAGTCGATGTGGCAAAAGTGCTGGAACACCAATCAGAGCCTGGTGCACAACCTGCGCTTCCGCGAACGCGGCCCACTCAAGTCTTGGAGACCAGAGACTATGGCAGAAGCCATCTTCTCCGTGCTGAAGGAGGGCCTGTCCCTCTCCCAGGCTGCGAGGAAGTACGACATACCGTACCCAACTTTCGTGCTGTACGCTAATCGTGTCCACAATATGCTCGGACCCAGCGCTGATGGAGGAGCAGATTTGAGGCCCAAGGGGCGCGGGCGCCCGCAGCGCATCCTGCTGGGCGTGTGGCCCGACGAGCACATCCGCGGCGTGATCCGCGCCGTCGTCTTTCGCGACACACACGCGCCGCACTCGGCGCACCACATCAAGGAGGAGGTGTTGCCGGCGTACCCCCAGATCACGGACGGCTTGACAGTCGGCACCGTTCCGTACGGGGCGGTGCCGTGCGGCAATGGGCGCGAAGGCGGCGTGTCCCCGAACGCGGCGGCCGCGGCCGCCGTCGCCGCTGTTGCACACGGCCTGCGCCGGCAGATGTGCAACATGGTGGTGGCAGCTCAGAGGCCACCCGACCACCCGCCGCACTTGGGCCTGCCGCCGCTGCCGCTGCAGTCGCCGCGCTTGCCCTCACCGATGTCCGCCGGGCTGGAGTCACCCCTGTGCTCCCCACCACCGCCCGGCCATGCTCTCGAGCCGCCCAAGCCCGCTGACCCGTTCCGCCCCTTCGCCTCCCCGCGCCCTGACAGCCGCTACGGCGAGCGCGACGTCGTCGCTGAGATCACCGAGATGGGCCCGCCGAAGACACCGGTGCCTCTCACTAAGAATGGCAAGGACATGTCGATGCCCGTCAAGATGGAGCCGCCGGTGGATGCGCGCGTGGAGCACATGTGA
- Protein Sequence
- MLFYLFSADSYQYQLQSMWQKCWNTNQSLVHNLRFRERGPLKSWRPETMAEAIFSVLKEGLSLSQAARKYDIPYPTFVLYANRVHNMLGPSADGGADLRPKGRGRPQRILLGVWPDEHIRGVIRAVVFRDTHAPHSAHHIKEEVLPAYPQITDGLTVGTVPYGAVPCGNGREGGVSPNAAAAAAVAAVAHGLRRQMCNMVVAAQRPPDHPPHLGLPPLPLQSPRLPSPMSAGLESPLCSPPPPGHALEPPKPADPFRPFASPRPDSRYGERDVVAEITEMGPPKTPVPLTKNGKDMSMPVKMEPPVDARVEHM
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_01281233;
- 90% Identity
- iTF_01080655;
- 80% Identity
- -