Aher001072.2
Basic Information
- Insect
- Agonopterix heracliana
- Gene Symbol
- bab1
- Assembly
- GCA_963693445.1
- Location
- OY856307.1:17147632-17159500[-]
Transcription Factor Domain
- TF Family
- HTH
- Domain
- HTH_psq domain
- PFAM
- PF05225
- TF Group
- Helix-turn-helix
- Description
- This DNA-binding motif is found in four copies in the pipsqueak protein of Drosophila melanogaster [1]. In pipsqueak this domain binds to GAGA sequence [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 2 1e-17 1.7e-14 53.9 0.0 1 43 54 97 54 99 0.95 2 2 3 4.9e+03 -2.0 1.6 6 15 190 199 186 201 0.83
Sequence Information
- Coding Sequence
- ATGGAAAACTCCCACGCTTGGCTTGGAGCCTCTACATCATCTATAGCAGCAGACAGCTACCAGTATCAACTTCAGTCGATGTGGCAGAAATGCTGGAACACAAACCAGAGTCTCGTCCATAACCTTCGGTTCCGCGAGCGTGGCCCTTTGAAGTCCTGGCGGCCGGAGACAATGGCCGAAGCCATCTTCTCCGTGCTTAAGGAAGGCCTGTCGCTATCCCAAGCGGCGCGGAAGTACGACATACCGTACCCGACGTTCGTGCTGTACGCCAACCGGGTTCACAACATGCTGGGGCCCAGCGCTGATGGTGGTGCAGATTTGAGGCCGAAAGGTCGCGGGCGTCCTCAGAGGATCTTGCTGGGCGTGTGGCCCGACGAACACATCCGCGGCGTCATCCGCGCCGTCGTCTTCCGGGACACTCACACTCCCCATACCACACACCATATCAAGGAGGAGGTTCTTCCCGTCTATCCTTCTATTACGGATGGAATGGCAGTGCAGAACACATATGGCAACGTGTCGTGTGGCAACGGACGCGAGGGTGGAGTGTCGCCCAACGCTGCCGCCGCCGCAGCCGTAGCCGCCGTGGCGCATGGCCTCCGCCGGCAGATGTGCAACATGGTGGTGGCGGCCCAGCGCCCGCCAGACCACCCGCCGCACCTCGGCCTGCCGCCCCTGCCCCTGCAGTCGCCGCGTCTCCCCTCACCGCTCTCCGCAGGGCTCGAGTCACCCCTGTGCTCTCCACCGCCGCCGGGTCATGCGCTAGAACCGCCAAAGCCCGCCGACCCCTTCCGCCCATTCGCTTCGCCGCGACCTGATAGCCGCTACAGCGAGCGCGACGTCGTCGCTGAAATCACTGAAATGGGACCACCCAAAACCCCCGTGCCGATGGCAAAGAACGGAAAGGATCAACTATCGACACCGGTACCGGTGAAGATGGAGCCTCCGCCGGCAGAGGCTCGCGCAGAGAACATCTGA
- Protein Sequence
- MENSHAWLGASTSSIAADSYQYQLQSMWQKCWNTNQSLVHNLRFRERGPLKSWRPETMAEAIFSVLKEGLSLSQAARKYDIPYPTFVLYANRVHNMLGPSADGGADLRPKGRGRPQRILLGVWPDEHIRGVIRAVVFRDTHTPHTTHHIKEEVLPVYPSITDGMAVQNTYGNVSCGNGREGGVSPNAAAAAAVAAVAHGLRRQMCNMVVAAQRPPDHPPHLGLPPLPLQSPRLPSPLSAGLESPLCSPPPPGHALEPPKPADPFRPFASPRPDSRYSERDVVAEITEMGPPKTPVPMAKNGKDQLSTPVPVKMEPPPAEARAENI
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_01281233;
- 90% Identity
- iTF_00922809;
- 80% Identity
- -