Aeph014572.2
Basic Information
- Insect
- Acentria ephemerella
- Gene Symbol
- bab1
- Assembly
- GCA_943193655.1
- Location
- CALPDL010000101.1:538932-543551[+]
Transcription Factor Domain
- TF Family
- HTH
- Domain
- HTH_psq domain
- PFAM
- PF05225
- TF Group
- Helix-turn-helix
- Description
- This DNA-binding motif is found in four copies in the pipsqueak protein of Drosophila melanogaster [1]. In pipsqueak this domain binds to GAGA sequence [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 2 6.9e-18 1.3e-14 53.9 0.0 1 43 62 105 62 107 0.95 2 2 2.8 5.2e+03 -2.5 2.0 6 15 194 203 190 204 0.82
Sequence Information
- Coding Sequence
- ATGATTGCCATTGAGCAACTTCCTCCCAAGCAAAGAGTTAGACGTCAGACAGAGGTCCCCGATTCGAAACCCGCAGACAGTTACCAGTACCAGCTGCAGTCTATGTGGCAAAAGTGCTGGAACACCAACCAGAGCCTCGTGCACAATTTGAGGTTCCGAGAGCGCGGCCCACTCAAGTCCTGGCGACCAGAAACAATGGCTGAAGCCATATTTTCGGTTCTGAAGGAAGGACTGTCCCTCTCGCAAGCCGCCAGGAAATATGACATACCATACCCAACATTCGTACTGTACGCCAACCGCGTCCACAACATGCTCGGACCGAGCGCTGACGGAGGGGCAGATTTGAGACCAAAGGGGCGTGGCAGACCGCAAAGAATTCTGCTTGGCGTCTGGCCTGATGAGCACATCCGCGGCGTCATCCGCGCTGTTGTCTTTAGAGACACCCACCACTCACACCACATCAAGGAGGAGGTGCTTCCATACCCCTCTATTACGGACGGCATGTCTGTACCCACGACATACGGCAACGTGGCGTGTGGAAATGGACGAGAAGGTGGCGTATCACCAAATGCCGCCGCAGCTGCTGCTGTGGCCGCTGTCGCACACGGCCTACGTCGCCAGATGTGCAACATGGTGGTAGCGGCCCAGCGACCCCCCGACCACCCTCCGCATCTGGGCCTGCCCCCGCTACCCCTGCAATCTCCACGGCTACCTTCACCACTGTCCGCCGGGCTAGAATCGCCACTCTGTTCGCCCCCTCCGCCTGGACACGCTCTAGAGCCTCCAAAGCCAACCGACCCTTTCCGCCCGTTCGCCTCACCTCGCCCGGATAGCCGATATGGTGATCGTGATATCGCGGAAATAACTGAGATGGGACCCCCGAAGACTCCGATTTCTGCTTCAGCCAAGAACGGCAAGGAGCTCTCTACGCCGGTGCCGGTGAAGATGGAGCTGCCGCCGGCGGAGGCGCGTGCGGAGAACATCTGA
- Protein Sequence
- MIAIEQLPPKQRVRRQTEVPDSKPADSYQYQLQSMWQKCWNTNQSLVHNLRFRERGPLKSWRPETMAEAIFSVLKEGLSLSQAARKYDIPYPTFVLYANRVHNMLGPSADGGADLRPKGRGRPQRILLGVWPDEHIRGVIRAVVFRDTHHSHHIKEEVLPYPSITDGMSVPTTYGNVACGNGREGGVSPNAAAAAAVAAVAHGLRRQMCNMVVAAQRPPDHPPHLGLPPLPLQSPRLPSPLSAGLESPLCSPPPPGHALEPPKPTDPFRPFASPRPDSRYGDRDIAEITEMGPPKTPISASAKNGKELSTPVPVKMELPPAEARAENI
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_01281233;
- 90% Identity
- iTF_01080655;
- 80% Identity
- -