Dacu010044.2
Basic Information
- Insect
- Drosophila acutilabella
- Gene Symbol
- -
- Assembly
- GCA_035046005.1
- Location
- JAWNOK010000024.1:10025827-10030795[-]
Transcription Factor Domain
- TF Family
- HTH
- Domain
- HTH_psq domain
- PFAM
- PF05225
- TF Group
- Helix-turn-helix
- Description
- This DNA-binding motif is found in four copies in the pipsqueak protein of Drosophila melanogaster [1]. In pipsqueak this domain binds to GAGA sequence [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 4 1.3e-11 2.3e-08 33.9 0.0 1 40 612 652 612 655 0.90 2 4 7.1e-14 1.2e-10 41.1 0.1 2 39 667 704 666 707 0.94 3 4 1.7e-17 2.9e-14 52.7 0.0 1 45 721 766 721 766 0.98 4 4 1.7e-19 3e-16 59.1 0.0 1 43 773 816 773 817 0.97
Sequence Information
- Coding Sequence
- ATGGGTGTGGCCTCTCGTGTTCCAAAGAAGGCCTCTAAAATTGCACAGAAGAGTTTTAGGgGCCTGTTACGCACCGCTGAGCAATTGAAAATCAAAGGACTCTGCGAGCCAGCTGAGAACGCGGATGATTTGAATGACGCTGCATCGGCGACGATTACCGTTTCGGAGAACATACAGCAGGCGGTTGTTGGGAATATTGTGAATGCGAGCCTAGTGCCCGGCGCGCCCTCGCCCACAATCGAGCAGCagcatcaccagcagcagcagcagcagcaacaacagcagcagcaacaacaacagcagcagcaacagcaggcacagcagcagcagcaacaggagcatcaacagcaggtgcaacaacagcagctggttAACAGTGCATTGCTGGCACAGCATAGTCTGGCAACAAACAGTGGCATACAATTGGCCAATACGGCTGGTCAACAGCTGCTGAGCACTACCActggcagtagcagcagcctgcagcagttgcagcaacaacaacagcagcagcaacaacagttgcagccaACGCCGCGTAAGTCGCGCTTGCGTAGACGTTCCAAATCACCAGAATTGCAACTAGGTGGCAACGTTACACCACAGCCAGCacatcaccagcagcagcaacaacaacagcaaacacatcACCAACATCATCATCCACAAACGATACTCATACAGGGACAAAATCAAACATCGATCGTGAGTCTACAGCAAACAGCTGACGGCAATTATATACCTGTACCGGCAACAGCTGGCGACGACAACGACTCCGATAGCGATAATAAGCCCCAAAAGATTTGCAAAACAGAACAATCGGTGGCCTCACCCACATCCAACTCGTCCACATCGAATAATGCCGCTTCTGGCGTGAGCGGCCAAGCGATTGTGACACAAATTGTAGTAGCGCGCGACGGAAAAGATAATAAAATGACTAGTTTAGGCATGGGCATGAACGGCGGTCTGTTGGGCGTGCCCATGGGATTTCTGGACTTTACACCGGAACCACCAGCACCATCGGCCACACCAGTCACCGTAACGGAACACGTCGATTTATCGTGCAACCCCAGCACCGATACACGCGATCTATCAAATCCCACCGAACCGCTCGACATTGACAATCATTTGGCTCAGCAAATCCATCGGCTCGATCAATCTCCCATGCATTCAATAGCGCATCATCACACGACCGGCGACGAGAGCAACTCGAATCTGGTGCAGCATATCAAAAGTGAAGTGATTGAGGCCAAGCACCTGGCACatgtgcaacaacagcaacagcagcagcagcaacaacagcagcagcaacagcaacaacaacagcagcaacatgcacatcagcatcatcagcatTTGCATGCACAGCAATTGTTGGCGCAgagtcagcaacaacagcagcagcaacatcaacaacaacagcagcagcaacagcagcaacaacaacagcaacagcagcaacaacagcaacaggcagcGGTGCATGCACAGCATGCCACACATGCTGAAATCAGTGGCGCCACTGTTATGGAGATTGATCCGAGTCAGATCAAACACGAGCCGGGCATGATCATAACGCCAGAGATTGTCAACATGATGTCCACTGGGCATATGGATATGTACAACTCGGATACGAGCGAGGACTCAATGATGATCGCTAACGGTTCGCCGCACGATCAAAATGAGCCGCATTATACGAATTTGGATCAGCAACACGGCGGCTTGGGTGGCAGCGTTTGCGGCCCCGGCGccggtggtgttggtggtggtggcggcaTTGGTGGTGGTGGTAATGCTGGCGAGAAAGGTCAGTTTAATGGTCCCAAAGCTTGGACACAAGATGATATGAATTCAGCTTTAGATGCATTAAAGAATCAAAACATGAGCCTGACGAAAGCATCTGCCATTTATGGCATACCATCAACGACATTATGGCAGCGTGCACACCGTTTGGGCATCGAAACGCCTAAGAAGGAGGGCGGAACGAAATCATGGAACGAGGATGCATTACAGAATGCATTGGAGGCATTGCGATCGGGCCAAATATCGGCAAATAAAGCATCAAAAGCGTTTGGTATACCCTCATCGACGCTCTACAAGATAGCGCGTCGGGAGGGCATACGACTGGCGGCGCCATTCAATGCCGCACCAACCACGTGGACACCCGAGGACTTGGAGCGTGCATTGGAGGCGATACGAGCTGGTAATACGTCGGTGCAAAAAGCAAGTGCCGAATTTGGTATACCGACAGGAACACTTTACGGACGCTGCAAGCGGGAGGGAATCGAATTATCGCGTTCAAATCCAACACCTTGGTCCGAGGATGCCATGAACGAGGCATTAAACTCAGTGCGCGTTGGTCAAATGTCCATCAATCAGGCGGCCATACACTATAACCTGCCCTACAGTTCGCTctacggacgctttaagcggggCAAATACGATGTGGTGGCTAATACCAGTGGCGTCTCGCTAATGAACACATCGGGCAACACGACCGGCAGCATTGAGATTATCGAACATAGTCAGGAGAACTCGTTGCATatgttgcagcagcagttcCCGTACAGTCCGTCGCCGCATCCACCGACGCCGCAGCATCATAGTACACCGCAGCACCACAGTTCGCAGCAGGGGCCACCGACGCCACAGCATATGCAACAGCATGTGGTGCACATGCAGCAACAGTCGCCGCATCAGGcgcatcatcagcagcaacagcacttgcagcagcagcaacaggatgTGGTAACCTCAAGTAGCCAAGTGGTGCatacacagcagcagcaacaacagcagcagcagcagcaacaacagcagcagcttcaacaGATCTATCAGCATCATGGAACGCCGGAGCGTAGTTGA
- Protein Sequence
- MGVASRVPKKASKIAQKSFRGLLRTAEQLKIKGLCEPAENADDLNDAASATITVSENIQQAVVGNIVNASLVPGAPSPTIEQQHHQQQQQQQQQQQQQQQQQQQQAQQQQQQEHQQQVQQQQLVNSALLAQHSLATNSGIQLANTAGQQLLSTTTGSSSSLQQLQQQQQQQQQQLQPTPRKSRLRRRSKSPELQLGGNVTPQPAHHQQQQQQQQTHHQHHHPQTILIQGQNQTSIVSLQQTADGNYIPVPATAGDDNDSDSDNKPQKICKTEQSVASPTSNSSTSNNAASGVSGQAIVTQIVVARDGKDNKMTSLGMGMNGGLLGVPMGFLDFTPEPPAPSATPVTVTEHVDLSCNPSTDTRDLSNPTEPLDIDNHLAQQIHRLDQSPMHSIAHHHTTGDESNSNLVQHIKSEVIEAKHLAHVQQQQQQQQQQQQQQQQQQQQQHAHQHHQHLHAQQLLAQSQQQQQQQHQQQQQQQQQQQQQQQQQQQQQAAVHAQHATHAEISGATVMEIDPSQIKHEPGMIITPEIVNMMSTGHMDMYNSDTSEDSMMIANGSPHDQNEPHYTNLDQQHGGLGGSVCGPGAGGVGGGGGIGGGGNAGEKGQFNGPKAWTQDDMNSALDALKNQNMSLTKASAIYGIPSTTLWQRAHRLGIETPKKEGGTKSWNEDALQNALEALRSGQISANKASKAFGIPSSTLYKIARREGIRLAAPFNAAPTTWTPEDLERALEAIRAGNTSVQKASAEFGIPTGTLYGRCKREGIELSRSNPTPWSEDAMNEALNSVRVGQMSINQAAIHYNLPYSSLYGRFKRGKYDVVANTSGVSLMNTSGNTTGSIEIIEHSQENSLHMLQQQFPYSPSPHPPTPQHHSTPQHHSSQQGPPTPQHMQQHVVHMQQQSPHQAHHQQQQHLQQQQQDVVTSSSQVVHTQQQQQQQQQQQQQQQLQQIYQHHGTPERS
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_00557827; iTF_00519079; iTF_00610569; iTF_00585107; iTF_00533721; iTF_00601696; iTF_00608360; iTF_00802761; iTF_00832073; iTF_01326313; iTF_01320386; iTF_01327083; iTF_01325583; iTF_01570161; iTF_00805885; iTF_01327808; iTF_00901418; iTF_00583598; iTF_00516911; iTF_00570316; iTF_00498069; iTF_00501722; iTF_00495777; iTF_00526497; iTF_00496514; iTF_00582180; iTF_00520549; iTF_00538149; iTF_00557125; iTF_00606981; iTF_00482150; iTF_00609798; iTF_00576263; iTF_00522089; iTF_00575498; iTF_00490700; iTF_00506028; iTF_00619758; iTF_00805102; iTF_00573967; iTF_00499504; iTF_00528720; iTF_00560176; iTF_00558579; iTF_00495028; iTF_00548724; iTF_00566708; iTF_00576980; iTF_00593012; iTF_00616116; iTF_00497301; iTF_00521269; iTF_00525045; iTF_00562389; iTF_00598069; iTF_00508246; iTF_00542358; iTF_00518359; iTF_01321111; iTF_00530873; iTF_00564570; iTF_00595866; iTF_00614107; iTF_00509020; iTF_00527965; iTF_00589470; iTF_00595166; iTF_00597278; iTF_00567455; iTF_00803519; iTF_00492881; iTF_00493038; iTF_00485778; iTF_00537428; iTF_00472282; iTF_00472441; iTF_00585885; iTF_01322014; iTF_01321841; iTF_00568895; iTF_00582879; iTF_00513376; iTF_00523040; iTF_00522877;
- 90% Identity
- iTF_00519079;
- 80% Identity
- -