Dhis019416.2
Basic Information
- Insect
- Drosophila histrio
- Gene Symbol
- -
- Assembly
- GCA_958299025.2
- Location
- OY729167.1:22837100-22843659[-]
Transcription Factor Domain
- TF Family
- HTH
- Domain
- HTH_psq domain
- PFAM
- PF05225
- TF Group
- Helix-turn-helix
- Description
- This DNA-binding motif is found in four copies in the pipsqueak protein of Drosophila melanogaster [1]. In pipsqueak this domain binds to GAGA sequence [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 4 1.1e-11 2.3e-08 33.9 0.0 1 40 605 645 605 648 0.90 2 4 5.9e-14 1.3e-10 41.1 0.1 2 39 660 697 659 700 0.94 3 4 1.4e-17 3e-14 52.7 0.0 1 45 714 759 714 759 0.98 4 4 1.4e-19 3e-16 59.1 0.0 1 43 766 809 766 810 0.97
Sequence Information
- Coding Sequence
- ATGCAAGGCCTCATTGTGCTGGGTCTGTTACGCACCGCGGAACAACTGAAAATCAAAGGACTCTGTGAGCCGGCTGAGAATGCGGATGATTTGAATGATGCTGCGTCGGCGACGATAACCGTATCGGAGAATATACAACAGGCGGTCGTTGGCAATATTGTGAATGCGAGCTTAGTGCCCGGCGCGCCCTCGCCCACAAtcgaacagcagcagcagcagcaacaacagcagcaacaccatcaacaacagcagcagcagcaacagcagcaggaacatcagcagcaggtgcaacaacagcagctggtgAACAGTGCATTGCTTGCACAGCATAGTCTTGCAACAAATAGTGGCATACAATTGGCCAATGCGGCTGGGCAACAGCTGCTAAGCAATACAactggcagcagcagtagcagcctgcaacagttgcaacaacagcagcagcagcagcaacagcaacaacagttgcagccaACGCCGCGTAAATCACGTTTGCGTAAACGTTCAAAATCACCAGATTTGCAACTAGGTGGCAACGCTACaggacaacaaccacagccaGCAcatcaccaacaacaacagcaacaacaacaacaacagcaacagcagcagcagcaacaacatcatcaacatcatcatccaCAAACGATACTCATTCAGGGACAAAATCAAACATCTATCGTTAGTCTACAACAAACAGCGGACGGCAATTATATACCAGTACCAACAACTGGCGACGATTCCGATAGCGATAATAAACCGCAAAAGATTTGCAAGACAGAACAATCGGTGGCCTCGCCGGCATCCAACTCGTCAGCATCGAATAATGCCGCTTCTGGCGTGAGCGGCCAAGCGATTGTGACACAAATTGTAGTAGCGCGCGACGGAAAAGATAATAAAATGACTAGTTTAGGCATGGGCATGaacGGCGGTCTGTTGGGCGTGCCCATGGGATTTCTGGACTTTACACCGGAACCACCAGCACCATCGGCCACACCTGTCACCGTAACGGAACATGTCGATCTATCGTGCAACCCGAGCACCGATACACGCGATCTATCAAATCCCACCGAACCGCTCGACATAGACAATCATTTGGCTCAGCAAATCCATCGGCTCGATCAATCTCCCATGCACTCGATATCGCATCATCACACGACCGGCGACGAGAGCAACTCGAATCTGGTGCAGCATATCAAAAGTGAAGTGATTGAGGCCAAGCATTTGGCGcatgtgcaacagcagcaacaacagcagcagcaacagcaacaacagcagcagcagcagcagcagcaacagcaacaacagcagcaacatgcacatcatcatcagcatttgCATGCACAGCAACTGTTGGCGCAaagtcagcagcaacagcagcagcagcaacaacagcagcaacaacaacagcaacagcaacagcaacagcagcaacatcaacagtcgTCGGTGCATGCACAACATGCTACACATGCAACACATGCAGAAATCAGTGGCGCCACTGTCATGGAGATTGATCCAAGCCAAATCAAGCATGAGCCGGGCATGATAATAACGCCAGAGATTGTCAATATGATGTCCACTGGGCATATGGaCATGTACAACTCGGATACGAGCGAGGACTCAATGATGATCGCCAACGGTTCGCCGCACGATCAAAATGAGCCGCATTATACGAATTTGGATCAGCAGCACGGCGGCCTGGGTGGCAGCGTTTGCGGCCCCGGCGCcggtggtgttggtggtggtggcggcaTTGGTGGTGGTGGTAATTCTGGCGAGAAAGGTCAGTTTAATGGTCCCAAAGCTTGGACACAAGATGATATGAATTCAGCTTTAGATGCATTAAAGAATCAAAACATGAGCCTGACGAAAGCATCTGCCATTTATGGTATACCATCAACGACATTATGGCAACGTGCTCATCGTTTGGGCATCGAAACGCCTAAGAAGGAGGGCGGCACCAAATCCTGGAATGAGGATGCATTACAGAATGCATTGGAGGCATTGCGATCGGGTCAAATATCGGCAAATAAAGCATCGAAAGCGTTTGGTATTCCCTCATCGACGCTCTACAAGATAGCGCGTCGGGAGGGTATACGGCTGGCGGCGCCATTCAATGCCGCACCAACCACGTGGACACCCGAGGATTTGGAGCGTGCATTGGAGGCGATACGTGCCGGTAATACGTCTGTGCAAAAAGCCAGTGCTGAATTTGGCATACCGACAGGAACACTTTATGGACGCTGCAAACGGGAGGGCATCGAATTATCGCGTTCAAATCCAACACCTTGGTCCGAGGATGCCATGAATGAGGCATTGAACTCAGTGCGCGTTGGCCAAATGTCCATCAATCAGGCGGCCATACATTACAACCTGCCCTACAGTTCGCTTTATGGGCGCTTCAAGCGCGGCAAATACGATGTTGTGGCAAATACCAGTGGCGTCTCGCTGATGAACACATCGGGCAACACGACCGGCAGCATTGAGATTATCGAGCATAGTCAGGAGAATTCGttgcatatgttgcagcaacaattcCCGTACAGTCCGTCGCCGCATCCGCCGACGCCGCAGCATCATAGTACGCCGCAGCATCACAATTCGCAGCAGGGGCCGCCGACGCCGCAGCATATGCAACAGCATGTGGTGCacatgcagcaacaacagtcgcCGCATCAGGCgcatcatcaacagcagcagcagcagcaacatttgcaacagcagcaacaggatgTGGTAACATCAAGCAGCCAAGTGGTGCAcagtcagcaacagcaacagcagcagcagcagcaacagcagcagcagttgcaacagaTTTATCAACATCATGGCACGCCCGAGCGTAGTTGA
- Protein Sequence
- MQGLIVLGLLRTAEQLKIKGLCEPAENADDLNDAASATITVSENIQQAVVGNIVNASLVPGAPSPTIEQQQQQQQQQQHHQQQQQQQQQQEHQQQVQQQQLVNSALLAQHSLATNSGIQLANAAGQQLLSNTTGSSSSSLQQLQQQQQQQQQQQQLQPTPRKSRLRKRSKSPDLQLGGNATGQQPQPAHHQQQQQQQQQQQQQQQQQHHQHHHPQTILIQGQNQTSIVSLQQTADGNYIPVPTTGDDSDSDNKPQKICKTEQSVASPASNSSASNNAASGVSGQAIVTQIVVARDGKDNKMTSLGMGMNGGLLGVPMGFLDFTPEPPAPSATPVTVTEHVDLSCNPSTDTRDLSNPTEPLDIDNHLAQQIHRLDQSPMHSISHHHTTGDESNSNLVQHIKSEVIEAKHLAHVQQQQQQQQQQQQQQQQQQQQQQQQQQHAHHHQHLHAQQLLAQSQQQQQQQQQQQQQQQQQQQQQQQHQQSSVHAQHATHATHAEISGATVMEIDPSQIKHEPGMIITPEIVNMMSTGHMDMYNSDTSEDSMMIANGSPHDQNEPHYTNLDQQHGGLGGSVCGPGAGGVGGGGGIGGGGNSGEKGQFNGPKAWTQDDMNSALDALKNQNMSLTKASAIYGIPSTTLWQRAHRLGIETPKKEGGTKSWNEDALQNALEALRSGQISANKASKAFGIPSSTLYKIARREGIRLAAPFNAAPTTWTPEDLERALEAIRAGNTSVQKASAEFGIPTGTLYGRCKREGIELSRSNPTPWSEDAMNEALNSVRVGQMSINQAAIHYNLPYSSLYGRFKRGKYDVVANTSGVSLMNTSGNTTGSIEIIEHSQENSLHMLQQQFPYSPSPHPPTPQHHSTPQHHNSQQGPPTPQHMQQHVVHMQQQQSPHQAHHQQQQQQQHLQQQQQDVVTSSSQVVHSQQQQQQQQQQQQQQLQQIYQHHGTPERS
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_00470787;
- 90% Identity
- iTF_00470787; iTF_00557827; iTF_00608360; iTF_00610569; iTF_00802761; iTF_00583598; iTF_00537428; iTF_01549495; iTF_00533721; iTF_00472282; iTF_00472441; iTF_00585885; iTF_00568895; iTF_00523040; iTF_00522877; iTF_00601696;
- 80% Identity
- -