Dbus002243.1
Basic Information
- Insect
- Drosophila busckii
- Gene Symbol
- br
- Assembly
- GCA_011750605.1
- Location
- NC:11093573-11139923[-]
Transcription Factor Domain
- TF Family
- HTH
- Domain
- HTH_psq domain
- PFAM
- PF05225
- TF Group
- Helix-turn-helix
- Description
- This DNA-binding motif is found in four copies in the pipsqueak protein of Drosophila melanogaster [1]. In pipsqueak this domain binds to GAGA sequence [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 4 8.1e-12 1.4e-08 33.8 0.0 1 40 683 723 683 726 0.90 2 4 4.5e-14 7.9e-11 41.0 0.1 2 39 738 775 737 778 0.94 3 4 1e-17 1.8e-14 52.6 0.0 1 45 792 837 792 837 0.98 4 4 1.1e-19 1.9e-16 59.0 0.0 1 43 844 887 844 888 0.97
Sequence Information
- Coding Sequence
- atggctgccGTGCGGGGTCATCAGTACTTTAGTTTACGTTGGAATAATTATCAAAATACGATGACGTCAGTGTTTCAACAGCTGCGCGAGGATCTATCCTTTGTCGATGTTACCTTGTCCTGTGAGCATGGCTCGCTCAAGGCTCACAAGgTTGTGCTCTCCGCCTGCTCCACATATTTTCAAAAGCTCTTGCTGGAGAATCCTTGCAAGCATCCAACCATCATCTTGCCCGCCGATATCATATTCACAGACCTCAAAACAATTATCGATTTTGTTTATCGCGGTGAAATCGATGTAACCGAATCAGATCTACAGGGTCTGTTACGCACCGCTGAACAATTGAAGATCAAAGGTCTCTGTGAACCGGCTGAGAACGCGGATGATTTGAATGACGCTGCATCGGCGACAATAACAGTATCGGAGAATATACAACAGGCGGTTGTTGGCAATATAGTGAATGCAAGTTTAGTCTCTGGCGCGCCCTCGCCCACActtgagcaacagcagcagcagcagcagcaacagcagcaggctcAAGCGCAAGCGcaagctcagcagcaacatcaggaGCATCAggtacaacagcaacaattggtGAATAGCTCGTTGTTGGGGCAACATAGTTTGGCCACCAGCAGTGGCATACAGTTGGTTAATGCCGCTGGGCAACCGCTGCTgagcacaacaagcagcagcagcagcaatctgcaacagttgcaacatcaacagcagcagcaacaattgcagcccACACCGCGTAAATCGCGCTTACGCAAGCGTTCCAAGTCACCTGATTTGCTTACCAGCAGTCAGCAACCACAGCCAGcgcatcatcagcaacagcaacagcaacagcaacagcagcagcagcaacagcaacatcatcatccgCAAACGATACTCATACAGGGACAAAATCAAGCCTCAATTGTTAGTCTACAGCAAACGGCTGACGGCAATTATATACCCGTAACTACTGGCGACGATTCCGATAGCGATAACAAGCCACAAAAGATCTGCAAAACAGAACAATCGGTGGCCTCACCGGCATCCAACTCGTCCACATCGAATAATGCAGCGGGCGTGAGCGGCCAAGCGATTGTGACAAACATTGTAGTAGCGCGCGACGGAAAAGATAAAAATATGACTAGTTTAGGCATGGGCATGAACGGCGGGCTGTTGGGCGTGCCCATGGGCTTTCTGGACTTTACACCGGAACCACCAGCACCATCGGCCACACCAGTCACAGTAACGGAACATGTCGATCTATCGTGCAACCCCAGCACCGATACACGCGATCTATCAAATCCCACCGAACCGCTCGACATTGACAATCATTTGGCTCAGCAAATCCATCGGCTCGATCAATCTCCCATGCATTCAATAGCGCATCATCACACAACCGGCGACGAAAGCAACTCCAATCTGGTGCAGCACATCAAGAGTGAAGTGATTGAGGCCAAGCATTTGGCACATGTGcaggcgcaacagcagcagcagcagcaacaacaacagcagcagcagcaacagcaacaacaacaacagcagcagcaacagcaacagcaacatgcgcatcatcatcagcaacatttgcatgcacAGCAATTGGCGttgagtcagcagcagcaacagcaacaacatcaacagcagcagcaggcggccGTGCATGCACAGCATGCGGGGCATGCCACGCATGCGGAAATCAGTGGCGCCACTGTCATGGAGATTGATCCGAGCCAAATAAAACACGAGCCAGGCATGATTATAACGCCAGAGATTGTCAATATGATGTCCACTGGGCACATGGGTAAGTTTGACATGTACAACTCGGACACGAGCGAGGACTCTATGATGATCGCGAACGGTTCGCCGCACGATCAGAATGAGCCGCATTATACGAATTTGGATCAGCAACACGGCGGCCTGGGTGGCAGCGTTTGCGGCCCCGGCGccggtggtgctggtggtggtagcggcggcggtggcggtaTTGGTAATGCCAGCGCTGGCGAGGCGAAAGGTCAGTTTAATGGTCCCAAAGCTTGGACACAAGATGATATGAATTCAGCTTTAGATGCATTAAAGAATCAAAACATGAGCCTGACGAAAGCATCTGCCATTTATGGCATACCATCAACGACCTTATGGCAGCGTGCTCATCGTCTGGGCATCGAAACGCCAAAGAAGGAGGGCGGCACCAAATCGTGGAATGAGGATGCCTTGCAAAATGCCTTGGAGGCATTGCGTTCGGGTCAGATATCAGCGAATAAAGCATCCAAAGCGTTTGGTATACCCTCATCGACGCTCTATAAGATTGCGCGTCGTGAGGGTATACGGCTGGCGGCGCCGTTCAATGCCGCCCCAACCACGTGGACACCCGAGGATTTGGAGCGTGCATTGGAGGCGATACGAGCCGGCAATACGTCGGTGCAAAAAGCAAGTGCTGAATTTGGCATACCCACAGGAACTCTTTACGGACGCTGCAAGCGAGAGGGCATCGAGCTATCACGCTCGAATCCAACACCTTGGTCCGAAGATGCCATGAACGAGGCACTTAACTCAGTGCGcGTGGGTCAAATGTCGATTAACCAGGCGGCTATACATTACAACCTGCCCTACAGTTCGCTTTATGGGCGTTTCAAGCGTGGCAAGTACGATGTGGTGGCCAACACCAGTGGCGTCTCGCTAATGAACGCATCGGGCAATACGACCGGCAGCATTGAGATTATTGAGCATAGTCAGGAGAATTCGttgcatatgttgcagcaacagttcCCGTACAGTCCGTCGCCGCATCAGGGGCCGCCTACGCCGCAGCATCATAGCACGCCGCAGCATCAGAGCTCGCATCAGGGGCCACCAACGCCGCAGCATATGCAACAGCATGTGGtgcacatgcaacaacagTCGCCACATCAGGCCCACCATCAGCAGcacgtgcaacagcaacaagatgTGGTCACATCGAGCAGTCAAGTGGTGCatagccaacaacagcagcaacagcttcagCAGATCTATCAGCATCACGGCACGCCCGAGCGTAGTTGA
- Protein Sequence
- MAAVRGHQYFSLRWNNYQNTMTSVFQQLREDLSFVDVTLSCEHGSLKAHKVVLSACSTYFQKLLLENPCKHPTIILPADIIFTDLKTIIDFVYRGEIDVTESDLQGLLRTAEQLKIKGLCEPAENADDLNDAASATITVSENIQQAVVGNIVNASLVSGAPSPTLEQQQQQQQQQQQAQAQAQAQQQHQEHQVQQQQLVNSSLLGQHSLATSSGIQLVNAAGQPLLSTTSSSSSNLQQLQHQQQQQQLQPTPRKSRLRKRSKSPDLLTSSQQPQPAHHQQQQQQQQQQQQQQQHHHPQTILIQGQNQASIVSLQQTADGNYIPVTTGDDSDSDNKPQKICKTEQSVASPASNSSTSNNAAGVSGQAIVTNIVVARDGKDKNMTSLGMGMNGGLLGVPMGFLDFTPEPPAPSATPVTVTEHVDLSCNPSTDTRDLSNPTEPLDIDNHLAQQIHRLDQSPMHSIAHHHTTGDESNSNLVQHIKSEVIEAKHLAHVQAQQQQQQQQQQQQQQQQQQQQQQQQQQQHAHHHQQHLHAQQLALSQQQQQQQHQQQQQAAVHAQHAGHATHAEISGATVMEIDPSQIKHEPGMIITPEIVNMMSTGHMGKFDMYNSDTSEDSMMIANGSPHDQNEPHYTNLDQQHGGLGGSVCGPGAGGAGGGSGGGGGIGNASAGEAKGQFNGPKAWTQDDMNSALDALKNQNMSLTKASAIYGIPSTTLWQRAHRLGIETPKKEGGTKSWNEDALQNALEALRSGQISANKASKAFGIPSSTLYKIARREGIRLAAPFNAAPTTWTPEDLERALEAIRAGNTSVQKASAEFGIPTGTLYGRCKREGIELSRSNPTPWSEDAMNEALNSVRVGQMSINQAAIHYNLPYSSLYGRFKRGKYDVVANTSGVSLMNASGNTTGSIEIIEHSQENSLHMLQQQFPYSPSPHQGPPTPQHHSTPQHQSSHQGPPTPQHMQQHVVHMQQQSPHQAHHQQHVQQQQDVVTSSSQVVHSQQQQQQLQQIYQHHGTPERS
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_00470787;
- 90% Identity
- iTF_00493038;
- 80% Identity
- iTF_00493038;