Dsor010677.1
Basic Information
- Insect
- Drosophila sordidula
- Gene Symbol
- -
- Assembly
- GCA_035047465.1
- Location
- JAWNPQ010000186.1:1462144-1471342[+]
Transcription Factor Domain
- TF Family
- HTH
- Domain
- HTH_psq domain
- PFAM
- PF05225
- TF Group
- Helix-turn-helix
- Description
- This DNA-binding motif is found in four copies in the pipsqueak protein of Drosophila melanogaster [1]. In pipsqueak this domain binds to GAGA sequence [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 4 1.2e-11 1.8e-08 33.8 0.0 1 40 603 643 603 646 0.90 2 4 6.6e-14 1e-10 41.1 0.1 2 39 658 695 657 698 0.94 3 4 8.5e-18 1.3e-14 53.5 0.0 1 45 712 757 712 757 0.98 4 4 1.6e-19 2.4e-16 59.1 0.0 1 43 764 807 764 808 0.97
Sequence Information
- Coding Sequence
- ATGCCCTGCAAGGCGGAAGGCGGCGGTGGCCATCAGGGCTGGGGCACCGAGGGGCGGGCGGTAGACAGGTCAACACTGGACGCCAAGTGGGCGTGCGCCGACGGGGCGAAGCTGGACTCAGGTCTGCTGCGCACCGCGGAACAGCTGAAAATCAAAGGCCTCTGCGAGCCGGCTGAGAATGCGGATGATTTAAATGACGCGGCATCGGCGACAATAACCGTATCGGAGAACATACAGCAGGCGGTTGTTGGCAACATTGTGAATGCGAACCTAGTGCCCGGCGCGCCCTCGCCGACaatcgagcagcagcagcagcatcatcagcagcagcagcagcagcagcatcagcagcaacagcagcagcagcagcaggagcatcagcagcaggtgcagcagcagcaattggtGAACAGTGCGCTGCTGACACAGCATACGCTTGCAACAAACAGTGGCATACAATTGGCCAATGCGGCAGGGCAACAGCTGTTGAGCAACACAAGCGGCACAAGCAGCAGcctgcagcagttgcaacagcaacaacagcagcagcagcaacaattgcagccaACGCCGCGCAAATCGCGACTGCGTAAACGCTCCAAATCGCCAGATTTGCAACTGGGTGGCAACGCCGCAGGTCAGCAACCACAGCCGGCgcatcatcagcaacaacagcagcatcaacaacagcagcagcagcaacaacagcaacaacaacaacaacaacaacaccaccatCATCATCCGCAAACGATACTCATCCAGGGCCAAAATCAAACATCGATCGTTAGCCTGCAGCAAACGGCCGACGGCAATTATATACCCGTTAGCACCGCTGGCGACGACTCCGACAGCGATAACAAGCCGCAAAAGATCTGCAAGACAGAGCAATCGGTGGCCTCGCCGGCATCCAACTCGTCCACATCGAATAATGCAGCGGGCGTGAGCGGCCAGGCGATTGTGACACAAATTGTAGTAGCGCGCGACggaaaagataaaaatatgacTAGTTTAGGCATGGGCATGAACGGCGGTCTGTTGGGCGTGCCCATGGGCTTCCTGGACTTTACACCGGAACCACCAGCACCATCGGCCACACCAGTCACCGTTACGGAACATGTCGATCTATCGTGCAATCCCAGCACCGATACGCGCGATCTATCAAaTCCCACCGAACCGCTCGACATTGACAATCATTTGGCTCAGCAAATCCATCGGCTCGATCAATCTCCCATGCACTCGATAGCGCACCATCATGCAACTGGCGACGAGAGCAACTCGAATCTGGTGCAGCACATCAAAAGCGAGGTGATTGAGGCCAAGCACTTGGCGcatgtgcagcagcaacagcagcagcagcagcagcagcaacagcagcagcagcagcagcagcagcaacaacaacagcagcagcaacagcaacatgcacatcatcatcagcatatGCACGCTCAGCAATTGTTGGCGCagagccagcaacagcagcagcagcaacaccaacagcaacagcagcaggcggcggtGCATGCAGCACAGCATGCAGCGCATGCCACGCATGCGGAAATCGGTGGCGCCACTGTCATGGAGATTGATCCGAGCCAGATCAAGCATGAGCCGGGCATGATTATAACGCCAGAGATTGTCAATATGATGTCCACAGCGCATATGGACATGTACAACTCGGATACGAGCGAGGACTCAATGATGATCGCCAACGGTTCGCCGCACGATCAGAATGAGCCGCATTATACGAATTTGGATCAGCAGCACGGCGGCCTGGGTCAGTTTAATGGTCCCAAAGCTTGGACACAAGATGATATGAATTCAGCTTTAGATGCATTAAAGAATCAAAACATGAGCCTGACGAAAGCATCTGCCATTTATGGCATACCATCAACGACCTTATGGCAGCGTGCTCACCGTTTGGGCATCGAAACGCCTAAGAAGGAGGGCGGTACCAAATCGTGGAACGAGGATGCTCTGCAGAATGCATTGGAGGCATTGCGTTCGGGTCAAATATCGGCGAATAAAGCATCGAAAGCGTTTGGCATACCCTCATCGACGCTCTACAAGATAGCGCGTCGCGAGGGTATCCGGCTGGCGGCGCCATTCAATGCCGCACCAACCACGTGGACACCCGAGGACTTGGAGCGTGCATTGGAGGCGATACGCGCCGGCAGTACGTCCGTACAAAAAGCAAGTGCCGAATTCGGCATACCGACAGGAACACTTTATGGACGCTGCAAACGGGAGGGCATCGAACTGTCGCGTTCGAATCCAACACCTTGGTCCGAGGATGCCATGAACGAGGCATTGAACTCAGTGCGCGTCGGTCAAATGTCCATCAATCAGGCGGCCATACATTACAACCTGCCCTACAGTTCGCTCTACGGACGCTTCAAGCGTGGCAAGTACGATGTGGTGGCCAACACCAGTGGCGTCTCGCTGATCAACACCTCGGGCAACACGACCGGCAGCATTGAGATTATCGAGCATAGTCAGGAGAATTCGttgcatatgttgcagcaacagttCCCGTACAGTCCGTCGCCGCACCCGCCGACGCCGCAGCATCACAGCGCGCCGCAACATCACAGTACGCCGCTGCATCATGGCACGCCGCAGCATCACAGTTCGCAGCAGGGGCCGCCGACGCCGCAGAATATGCAACAGCATGTGGTGCACATGCAGCAGTCGCCGCACCAGgcgcaccaccagcagcagcagcacatgcAACAGGATGTGGTCACATCGAGCAGCCAGGTGGTGCAtagccagcaacagcagcagcagcaacagcagcagcaacagcaacagcagcagcagcagcagcttcagcagATCTATCAGCATCACGGCACGCCCGAGCGTAGTTGA
- Protein Sequence
- MPCKAEGGGGHQGWGTEGRAVDRSTLDAKWACADGAKLDSGLLRTAEQLKIKGLCEPAENADDLNDAASATITVSENIQQAVVGNIVNANLVPGAPSPTIEQQQQHHQQQQQQQHQQQQQQQQQEHQQQVQQQQLVNSALLTQHTLATNSGIQLANAAGQQLLSNTSGTSSSLQQLQQQQQQQQQQLQPTPRKSRLRKRSKSPDLQLGGNAAGQQPQPAHHQQQQQHQQQQQQQQQQQQQQQQHHHHHPQTILIQGQNQTSIVSLQQTADGNYIPVSTAGDDSDSDNKPQKICKTEQSVASPASNSSTSNNAAGVSGQAIVTQIVVARDGKDKNMTSLGMGMNGGLLGVPMGFLDFTPEPPAPSATPVTVTEHVDLSCNPSTDTRDLSNPTEPLDIDNHLAQQIHRLDQSPMHSIAHHHATGDESNSNLVQHIKSEVIEAKHLAHVQQQQQQQQQQQQQQQQQQQQQQQQQQQQHAHHHQHMHAQQLLAQSQQQQQQQHQQQQQQAAVHAAQHAAHATHAEIGGATVMEIDPSQIKHEPGMIITPEIVNMMSTAHMDMYNSDTSEDSMMIANGSPHDQNEPHYTNLDQQHGGLGQFNGPKAWTQDDMNSALDALKNQNMSLTKASAIYGIPSTTLWQRAHRLGIETPKKEGGTKSWNEDALQNALEALRSGQISANKASKAFGIPSSTLYKIARREGIRLAAPFNAAPTTWTPEDLERALEAIRAGSTSVQKASAEFGIPTGTLYGRCKREGIELSRSNPTPWSEDAMNEALNSVRVGQMSINQAAIHYNLPYSSLYGRFKRGKYDVVANTSGVSLINTSGNTTGSIEIIEHSQENSLHMLQQQFPYSPSPHPPTPQHHSAPQHHSTPLHHGTPQHHSSQQGPPTPQNMQQHVVHMQQSPHQAHHQQQQHMQQDVVTSSSQVVHSQQQQQQQQQQQQQQQQQQQLQQIYQHHGTPERS
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_00470787;
- 90% Identity
- iTF_00538149;
- 80% Identity
- -