Htri016761.1
Basic Information
- Insect
- Hirtodrosophila trivittata
- Gene Symbol
- -
- Assembly
- GCA_035045065.1
- Location
- JAWNNK010001311.1:5888464-5895312[+]
Transcription Factor Domain
- TF Family
- HTH
- Domain
- HTH_psq domain
- PFAM
- PF05225
- TF Group
- Helix-turn-helix
- Description
- This DNA-binding motif is found in four copies in the pipsqueak protein of Drosophila melanogaster [1]. In pipsqueak this domain binds to GAGA sequence [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 4 1.3e-11 2.5e-08 33.8 0.0 1 40 652 692 652 695 0.90 2 4 7.4e-14 1.4e-10 41.0 0.1 2 39 707 744 706 747 0.94 3 4 1.7e-17 3.2e-14 52.7 0.0 1 45 761 806 761 806 0.98 4 4 1.7e-19 3.2e-16 59.0 0.0 1 43 813 856 813 857 0.97
Sequence Information
- Coding Sequence
- ATGCTGCTGCGACGGCTGCCAACTGCAGTGGACGACAGTCCCACCCCAACCCACCCCCTCGCCTCATCCTTCACCCCGACTAGGGAGTGGGGCGTGGGCCAAGCCAACTTGCAAACTGGACTCCAGTGCCCAGTGTCAACCAGTTTTGGTGGTAACCATACCAAAAATCTCCAAGTGCTGGACGCCGCCGCCGTAATGACTGGTCTGCTGCGGACCGCGgaacaattgaaaatcaaagGGCTCTGCGAGCCGGCTGAGAACGCGGATGATCTGAATGACGCTGCGTCGGCGACAATAACCGTTTCGGAGAATATACAACAGGCGGTTGTTGGCAGCATTGTGAATGCTAGTCTTGTGTCTGCGGCACCATCACCCACactcgagcagcagcagcagcatcaacagcaccagcaccagcaacatcagcagcaccagcaacagcaacaggagcatcagcagcaggtgcaacaccagcagctggTGAGCAGTGCGTTGATCTCGCAACATAGTCTTACGACGAGCAGCATACAGTTGGCGAGCGCTGGTGGGCAACAGCTGCTGAGTAACACAAGCAGTGctggtagcagcagcagcctgcaacagttgcagcagcagcagcagcaacaacaacagcaacaacagttgcagccaACGCCGCGTAAATCGCGACTGCGTAAACGCTCCAAATCGCCAGATCTGCAACTGGTTGGCAACGCCCCAGGCGCACAGTCGGCACatcaccaacaccaacaccagcagcaccagcagcagcaccagcaacagcaccagcagcagcaacagcagcagcaacagcatcaacatcattcacattcacatccacAAACGATACTCATTCAGGGACAAAATCAGACATCGATCGTCAGTCTACAGCAAACGGCTGACGGCAATTATATACCAGTTGCAACAACATCTGCTGCTGGCGAGGACTCCGATAGCGATAATAAGCCACAGAAGATCTGCAAGACAGAGCAATCGGTGGCATCCCCAGCATCCAACTCGTCCACATCGAATAATGCAGCAGCGGGCGTGAGCGGCCAGGCGATTGTCACACAAATTGTAGTAGCGCGCGAcggaaaagataaaaatatgacTAGTTTAGGCATGGGCATGaacGGCGGTCTGTTGGGCGTGCCCATGGGATTTCTGGACTTTACACCGGAACCACCAGCACCATCGGCCACACCAGTCACCGTTACGGAACATGTCGATCTGTCGTGCAACCCCAGCACCGATACACGCGATCTATCAAATCCCACCGAACCGCTCGATATAGACAATCATTTGGCTCAGCAGATCCATCGGCTCGATCAATCTCCCATGCACTCGATATCGCATCATCATTCGACCGGCGACGAGAGTAACTCGAATCTGGTGCAACACATCAAAAGCGAAGTGATTGAGGCCAAGCATTTGGCGCATGTTCaggcgcaacagcagcagcagcaacagcagcagcagcaacaacaacagcagcaacaccaacaacagcagcagcaacaacagcagcagcagcagcaacatgcacatcatcatcagcagcattTGCACACTCAGCAATTGCTGCAgagtcagcagcaacagcagcagcaacagcaacagcagcaacaacaacatcaacagcaacaggcagcgGCAGTGCATGCAGCACAGCAACATGCAGCACAGCAGCATGCAACGCATGCGGAAATAAGTGGCGCCACTGTCATGGAGATTGATCCGAGCCAGATAAAGCATGAGCCGGGCATGATTATAACGCCAGAGATTGTCAATATGATGTCCACTGGTCATATGGACATGTACAACTCGGATACGAGCGAGGACTCAATGATGATCGCAAATGGTTCGCCGCACGATCAGAATGAGCCGCATTATACGAATTTGGATCAGCAGCATGGGGCATTGGGTGGTCAGTTTAATGGTCCCAAAGCTTGGACACAAGATGATATGAATTCAGCTTTAGATGCATTAAAGAATCAAAACATGAGCCTGACGAAAGCATCTGCCATTTACGGTATACCCTCGACAACATTGTGGCAACGTGCCCATCGTCTGGGCATCGAAACGCCCAAGAAGGAGGGCGGCACCAAGTCCTGGAATGAGGATGCATTACAGAATGCCTTGGAGGCCTTGCGTTCGGGTCAAATCTCAGCTAACAAAGCATCGAAAGCCTTTGGTATACCCTCATCGACGCTCTATAAGATTGCGCGTCGGGAGGGTATACGGCTGGCGGCGCCATTCAATGCCGCACCAACCACATGGACACCCGAGGACCTGGAGCGTGCATTGGAGGCGATACGTGCCGGTAATACCTCTGTACAGAAAGCAAGTGCTGAATTTGGTATACCAACAGGAACACTTTATGGACGCTGCAAGCGGGAGGGCATCGAGCTGTCACGCTCGAATCCAACACCTTGGTCCGAGGATGCGATGAACGAGGCATTGAACTCAGTGCGCGTTGGCCAAATGTCCATCAACCAGGCGGCCATTCACTACAACCTGCCCTACAGTTCCCTCTATGGGCGCTTCAAGCGCGGCAAGTACGATGTGGTCACCAACACGAGTGGCGTCTCGTTGCTGAACAACACGTCGGGCAACACCACTGGCAGCATTGAGATTATCGAGCACAGTCAGGAGAATTCGttgcatatgttgcagcagcagttccCGTACAGTCCGTCGCCGCATGCCCCGCCGACGCCGCAACATCATAGCACACCGCAGCATCACAGTTCTCAGGGGCCGCCGACGCCGCAGCATATGCAACAGCATGTGGTGCAtatgcagcagcagtcgccGCATCAGGCAcaccatcaacagcagcacatGCAACAGGATGTGGTAACATCGAGCAGCCAAGTGGTGCAtagccagcaacagcaacagcagcttcagcaaATCTATCAGCATCACGGCACGCCCGAGCGTAGTTGA
- Protein Sequence
- MLLRRLPTAVDDSPTPTHPLASSFTPTREWGVGQANLQTGLQCPVSTSFGGNHTKNLQVLDAAAVMTGLLRTAEQLKIKGLCEPAENADDLNDAASATITVSENIQQAVVGSIVNASLVSAAPSPTLEQQQQHQQHQHQQHQQHQQQQQEHQQQVQHQQLVSSALISQHSLTTSSIQLASAGGQQLLSNTSSAGSSSSLQQLQQQQQQQQQQQQLQPTPRKSRLRKRSKSPDLQLVGNAPGAQSAHHQHQHQQHQQQHQQQHQQQQQQQQQHQHHSHSHPQTILIQGQNQTSIVSLQQTADGNYIPVATTSAAGEDSDSDNKPQKICKTEQSVASPASNSSTSNNAAAGVSGQAIVTQIVVARDGKDKNMTSLGMGMNGGLLGVPMGFLDFTPEPPAPSATPVTVTEHVDLSCNPSTDTRDLSNPTEPLDIDNHLAQQIHRLDQSPMHSISHHHSTGDESNSNLVQHIKSEVIEAKHLAHVQAQQQQQQQQQQQQQQQQHQQQQQQQQQQQQQHAHHHQQHLHTQQLLQSQQQQQQQQQQQQQQHQQQQAAAVHAAQQHAAQQHATHAEISGATVMEIDPSQIKHEPGMIITPEIVNMMSTGHMDMYNSDTSEDSMMIANGSPHDQNEPHYTNLDQQHGALGGQFNGPKAWTQDDMNSALDALKNQNMSLTKASAIYGIPSTTLWQRAHRLGIETPKKEGGTKSWNEDALQNALEALRSGQISANKASKAFGIPSSTLYKIARREGIRLAAPFNAAPTTWTPEDLERALEAIRAGNTSVQKASAEFGIPTGTLYGRCKREGIELSRSNPTPWSEDAMNEALNSVRVGQMSINQAAIHYNLPYSSLYGRFKRGKYDVVTNTSGVSLLNNTSGNTTGSIEIIEHSQENSLHMLQQQFPYSPSPHAPPTPQHHSTPQHHSSQGPPTPQHMQQHVVHMQQQSPHQAHHQQQHMQQDVVTSSSQVVHSQQQQQQLQQIYQHHGTPERS
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_00470787;
- 90% Identity
- iTF_00803519;
- 80% Identity
- -