Dqui016908.2
Basic Information
- Insect
- Drosophila quinaria
- Gene Symbol
- -
- Assembly
- GCA_035047525.1
- Location
- JAWNPO010000471.1:6569772-6576715[+]
Transcription Factor Domain
- TF Family
- HTH
- Domain
- HTH_psq domain
- PFAM
- PF05225
- TF Group
- Helix-turn-helix
- Description
- This DNA-binding motif is found in four copies in the pipsqueak protein of Drosophila melanogaster [1]. In pipsqueak this domain binds to GAGA sequence [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 4 1.2e-11 2.4e-08 33.9 0.0 1 40 575 615 575 618 0.90 2 4 6.8e-14 1.3e-10 41.1 0.1 2 39 630 667 629 670 0.94 3 4 1.6e-17 3.1e-14 52.8 0.0 1 45 684 729 684 729 0.98 4 4 1.6e-19 3.1e-16 59.2 0.0 1 43 736 779 736 780 0.97
Sequence Information
- Coding Sequence
- ATGGGGCGGTGGGCCAAGACTGGATTGCCAggTCTGTTGCGCACCGCGgaacaattgaaaatcaaaggACTCTGTGAGCCGGCTGAGAATGCGGATGATTTGAATGACGCTGCATCGGCGACGATAACCGTGTCGGAGAATATACAACAGGCGGTTGTTGGCAATATTGTGAATGCGAGCCTAGTGCCCGGCGCGCCCTCGCCCACAAtcgaacagcagcagcagcaacaccatcagcagcagcagcaacaacaggcacatcagcagcagcagcagcagcaggaacatcaacagcaggtgcaacaacagcagctggtgAACAGTGCATTGTTGGCGCAGCATAGTCTTGCAACAAATAGTGGCATACAATTGACCAATGCGGCAGGGCAACAGCTGCTGAGCAACACAAGTGGCAGCAGTAGCAGtctgcaacagttgcagcaacagcaacaacaacaacagcagcagcagcaacagttgcagccaACGCCGCGTAAATCGCGATTGCGTAAACGTTCAAAATCGCCAGATTTGCAACTAGGTGGCAACGCCACAGGGCAACAACCACAGCCGGCAcatcaccaacaacagcaacagcagcagcaacaacaacaacaacatcatcaacaacatcatccACAAACGATACTCATTCAGGGACAAAATCAAACATCGATCGTTAGTCTACAACAAACAGCGGACGGCAATTATATACCAGTTCCGACAACTGGCGACGATTCTGATAGCGATAATAAACCGCAAAAGATTTGCAAAACAGAACAATCGGTGGCCTCACCGGCATCCAACTCGTCCACATCGAATAATGCCGCATCTGGCGTGAGCGGCCAAGCGATTGTGACACAAATTGTAGTAGCGCGCGACggaaaagataataaaatgaCTAGTTTAGGCATGGGCATGAACGGCGGTCTGTTGGGCGTGCCCATGGGATTTCTGGACTTTACACCGGAGCCACCAGCACCATCGGCCACACCAGTCACCGTAACGGAACATGTCGATCTATCGTGCAACCCCAGCACCGATACACGCGATCTATCAAaTCCCACCGAACCGCTCGACATAGACAATCATTTGGCTCAGCAAATCCATCGGCTCGATCAATCTCCCATGCACTCGATATCGCATCATCATACGACCGGCGACGAGAGTAACTCGAATCTGGTGCAGCATATCAAAAGCGAAGTTATTGAGGCAAAGCACTTGGCTcatgtgcaacaacaacaacagcagcagcagcagcaacaacaacagcagcaacaacaacagcagcaacagcaacatgcacatcatcatcagcatttgCATGCTCAGCAATTGTTGGCGCAaagtcagcaacagcagcagcagcaacaacatcaacagcagcagcaacagcaacaacagcagcaacaacaacaacagcagcagcaacaggcagCAGTGCATGGACAGCATGCTACGCATGCCACACATGCGGAAATCAGTGGTGCCACTGTCATGGAGATTGATCCGAGCCAGATCAAGCATGAGCCGGGCATGATAATAACGCCAGAGATTGTCAATATGATGTCAACTGGGCATATGGACATGTACAACTCGGATACGAGCGAGGACTCAATGATGATCGCCAACGGTTCGCCGCACGATCAAAATGAGCCGCATTATACGAATTTGGATCAGCAACACGGCGGCCTGGGTCAGTTTAATGGTCCCAAAGCTTGGACACAAGATGATATGAATTCAGCTTTAGATGCATTAAAGAATCAAAACATGAGCCTGACGAAAGCATCTGCCATTTATGGCATACCATCAACGACATTATGGCAACGTGCTCATCGTTTGGGCATCGAAACGCCTAAGAAGGAGGGTGGCACCAAATCATGGAACGAGGATGCATTACAGAATGCTTTGGAGGCATTGCGATCGGGTCAAATATCGGCAAATAAAGCATCAAAAGCGTTTGGTATACCCTCATCGACGCTCTACAAGATAGCGCGTCGGGAGGGCATACGGCTGGCGGCGCCATTCAATGCCGCACCAACCACGTGGACACCCGAGGATTTGGAGCGTGCATTGGAGGCGATACGTGCCGGTAATACGTCTGTGCAAAAAGCAAGTGCTGAATTTGGCATACCGACAGGAACACTTTATGGACGCTGCAAACGAGAGGGCATCGAATTATCGCGTTCAAATCCAACACCTTGGTCCGAGGATGCCATGAACGAAGCATTGAACTCAGTGCGCGTTGGCCAAATGTCCATCAATCAGGCGGCCATACACTACAACCTGCCCTACAGTTCGCTTTATGGACGCTTCAAGCGCGGCAAGTACGATGTTGTGGCAAATACCAGTGGCATCTCGCTGATGAACACTTCGGGCAACACGACCGGCAGCATTGAGATTATTGAACATAGTCAGGAGAATTCGttgcatatgttgcagcaacagttCCCGTACAGTCCGTCGCCGCATCCGCCGACGCCGCAGCATCATAGTACGCCACAGCACCATAGTTCGCAGCAGGGTCCGCCGACGCCCCAGCACATGCAACAGCATGTGGTGCATATGCAACAGCAATCGCCGCATCAGGCgcatcatcaacagcagcagcagcaacagcacttgcaacagcagcagcaacaggatgTGGTAACATCGAGTAGCCAAGTGGTGCAtagccagcaacaacaacaacaacaacagcagctccaACAGATCTATCAGCATCACGGCACGCCCGAGCGTAGTTGA
- Protein Sequence
- MGRWAKTGLPGLLRTAEQLKIKGLCEPAENADDLNDAASATITVSENIQQAVVGNIVNASLVPGAPSPTIEQQQQQHHQQQQQQQAHQQQQQQQEHQQQVQQQQLVNSALLAQHSLATNSGIQLTNAAGQQLLSNTSGSSSSLQQLQQQQQQQQQQQQQLQPTPRKSRLRKRSKSPDLQLGGNATGQQPQPAHHQQQQQQQQQQQQHHQQHHPQTILIQGQNQTSIVSLQQTADGNYIPVPTTGDDSDSDNKPQKICKTEQSVASPASNSSTSNNAASGVSGQAIVTQIVVARDGKDNKMTSLGMGMNGGLLGVPMGFLDFTPEPPAPSATPVTVTEHVDLSCNPSTDTRDLSNPTEPLDIDNHLAQQIHRLDQSPMHSISHHHTTGDESNSNLVQHIKSEVIEAKHLAHVQQQQQQQQQQQQQQQQQQQQQQHAHHHQHLHAQQLLAQSQQQQQQQQHQQQQQQQQQQQQQQQQQQQAAVHGQHATHATHAEISGATVMEIDPSQIKHEPGMIITPEIVNMMSTGHMDMYNSDTSEDSMMIANGSPHDQNEPHYTNLDQQHGGLGQFNGPKAWTQDDMNSALDALKNQNMSLTKASAIYGIPSTTLWQRAHRLGIETPKKEGGTKSWNEDALQNALEALRSGQISANKASKAFGIPSSTLYKIARREGIRLAAPFNAAPTTWTPEDLERALEAIRAGNTSVQKASAEFGIPTGTLYGRCKREGIELSRSNPTPWSEDAMNEALNSVRVGQMSINQAAIHYNLPYSSLYGRFKRGKYDVVANTSGISLMNTSGNTTGSIEIIEHSQENSLHMLQQQFPYSPSPHPPTPQHHSTPQHHSSQQGPPTPQHMQQHVVHMQQQSPHQAHHQQQQQQQHLQQQQQQDVVTSSSQVVHSQQQQQQQQQLQQIYQHHGTPERS
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_00470787;
- 90% Identity
- iTF_00803519;
- 80% Identity
- -