Dpla007606.1
Basic Information
- Insect
- Drosophila planitibia
- Gene Symbol
- -
- Assembly
- GCA_035043785.1
- Location
- JAWNMS010000051.1:3841469-3847787[-]
Transcription Factor Domain
- TF Family
- HTH
- Domain
- HTH_psq domain
- PFAM
- PF05225
- TF Group
- Helix-turn-helix
- Description
- This DNA-binding motif is found in four copies in the pipsqueak protein of Drosophila melanogaster [1]. In pipsqueak this domain binds to GAGA sequence [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 4 1.3e-11 1.7e-08 33.9 0.0 1 40 607 647 607 650 0.90 2 4 7.1e-14 9.6e-11 41.1 0.1 2 39 662 699 661 702 0.94 3 4 1.7e-17 2.2e-14 52.7 0.0 1 45 716 761 716 761 0.98 4 4 1.7e-19 2.3e-16 59.1 0.0 1 43 768 811 768 812 0.97
Sequence Information
- Coding Sequence
- ATGGAAATTTTGCTGATTTGCTTTGTTATCTATTCGATTGTTTTGCAGGGTCTGCTGCGCACCGCGgaacaattgaaaatcaagGGTCTCTGTGAGCCGGCTGAGAATGCGGATGATTTAAATGACGCGGCTTTGGCGACAATAACCGTATCGGAGAACATACAGCAGGCGGTTGTTGGCAACATTGTGAATGCGAGCATAGTGCCCGGTGCGCCCTCGCCCACgatcgagcagcagcagcagcatcatcaacagcagcagcagcagcagcaacagcaacagcagcaacatcagcaggaACATCAGcaggtgcaacagcagcagcagcagcagcagctggtcaaCAGTGCTTTGCTGACACAGCATACGCTTGCAACAAACAGTGGCATACAGTTGGCCAACGCGGCtgggcaacagctgctgagCAATACAagcggcagcagtagcagtctgcaacagttgcagcagcagcagcaacagcagcagcaacagcaacaacagttgcagccaACGCCGCGTAAATCGCGAGTGCGAAAACGCTCGAAAACGCCTGATTTGCAACTGGGTGGCAACGCCGTCGTTCAACAACCACAGCCGGctcaccatcagcagcagcagcaacacaaccaacagcaacaacaacagcagcaacaacaacaacagcaacagcagcaacaccaacaacaccaacaacaacaacaacatcatcatccgCAAACGATACTCATCCAGGGACAGAATCAGACATCGATCGTGAGTCTACAGCAGACGGCAGACGGCAATTATATACCCGTTGGTTCCGCTGGCGACGATTCCGATAGCGATAATAAGCCGCAAAAGATTTGCAAGACAGAGCAATCGGTGGCCTCGCCGGCATCCAACTCGTCCACATCGAATAATGCAGCGGGCGTGAGCGGCCAGGCGATTGTGACACAAATTGTAGTAGCGCGCGACggaaaagataaaaatatgACTAGTTTAGGCATGGGCATGAACGGCGGTCTGTTGGGCGTGCCCATGGGCTTTCTGGACTTTACACCGGAACCACCAGCACCATCAGCCACACCAGTCACCGTTACGGAACACGTCGATCTATCGTGCAACCCCAGCACCGATACACGCGATCTATCAAATCCCACCGAACCGCTCGACATTGACAATCATTTGGCTCAGCAAATCCATCGGCTCGATCAATCTCCCATGCACTCAATAGCGCATCATCATGCAACCGGCGACGAGAGCAACTCGAATCTGGTGCAGCACATCAAAAGCGAGGTGATTGAGGCCAAACACTTGGCCCATGTAcaagcgcaacagcagcagcagcaacaacagcagcagcaacaacaacaacaacagcagcagcaacagcaacaacaacagcagcagcagcaacaacaacagcagcaacaacatgcacatcatcatcatcagttgCACGCTCAGCAACTGTTGGCCcagagtcagcagcagcagcagcagcaacaacaacagcagcagcaacaccaacagcagcagcagcagcaggcggcggTACATGCCGCACAGCATGGAGCGCATGCCACGCATGCGGAAATCAGCGGCGCCACTGTCATGGAGATTGATCCGAGCCAGATTAAGAATGAGCCGGGCATGATTATAACGCCAGAGATTGTCAATATGATGTCCACCGGGCATATGGACATGTACAACTCGGATACGAGCGAGGACTCAATGATGATCGCGAACGGTTCGCCGCACGATCAGAATGAGCCGCATTATACGAATTTGGATCAGCAGCACGGCGGACTGGGTCAGTTTAATGGTCCCAAAGCTTGGACACAAGATGATATGAATTCAGCTTTAGATGCATTAAAGAATCAAAACATGAGCCTGACGAAAGCATCTGCCATTTATGGCATACCATCAACGACCTTATGGCAGCGAGCACACCGTTTGGGCATCGAAACGCCTAAGAAGGAGGGCGGCACCAAATCGTGGAACGAGGATGCCCTGCAAAATGCCTTGGAGGCGTTGCGTTCGGGTCAAATATCGGCGAATAAAGCATCGAAAGCGTTTGGTATTCCCTCATCGACGCTGTACAAGATTGCGCGTCGCGAGGGCATACGGCTGGCGGCGCCATTCAATGCCGCACCAACCACGTGGACACCCGAGGATCTGGAGCGTGCATTGGAGGCGATACGCGCCGGCAATACCTCTGTACAAAAAGCAAGTGCCGAATTCGGCATACCGACAGGAACACTTTATGGACGCTGCAAACGGGAGGGCATCGAACTGTCGCGTTCGAATCCGACGCCCTGGTCTGAGGATGCCATGAACGAGGCATTGAACTCAGTGCGCGTTGGTCAAATGTCCATCAACCAGGCGGCCATACACTACAACCTGCCCTACAGTTCGCTCTACGGGCGATTCAAGCGTGGCAAGTACGATGTGGTTGCCAATACCAGTGGCGTCTCGCTGAACAACACCTCGGGCAATACGACCGGCAGCATTGAGATTATCGAGCATAGTCAGGAGAATTCGttgcatatgttgcagcaacagttcCCGTACAGTCCGTCGCCACATCCGCCGACGCCACAGCATCATAGTACGCCGCAGCATCACAGTTCGCAGCAGGGGCCGCCGACGCCGCAGCATATGCAACAGCATGTGGtgcacatgcaacagcagtcgCCACACCAGGCGcaccatcaacagcaacagcaacagcagcagcaacagcagcagcagcagcacatgcaacagcaacaggatgTGGTCACATCAAGCAGCCAAGTGGTGCatggccagcaacagcaacagcagcttcaGCAGATCTATCAGCATCACGGCACGCCCGAGCGCAGTTGA
- Protein Sequence
- MEILLICFVIYSIVLQGLLRTAEQLKIKGLCEPAENADDLNDAALATITVSENIQQAVVGNIVNASIVPGAPSPTIEQQQQHHQQQQQQQQQQQQQHQQEHQQVQQQQQQQQLVNSALLTQHTLATNSGIQLANAAGQQLLSNTSGSSSSLQQLQQQQQQQQQQQQQLQPTPRKSRVRKRSKTPDLQLGGNAVVQQPQPAHHQQQQQHNQQQQQQQQQQQQQQQQHQQHQQQQQHHHPQTILIQGQNQTSIVSLQQTADGNYIPVGSAGDDSDSDNKPQKICKTEQSVASPASNSSTSNNAAGVSGQAIVTQIVVARDGKDKNMTSLGMGMNGGLLGVPMGFLDFTPEPPAPSATPVTVTEHVDLSCNPSTDTRDLSNPTEPLDIDNHLAQQIHRLDQSPMHSIAHHHATGDESNSNLVQHIKSEVIEAKHLAHVQAQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQHAHHHHQLHAQQLLAQSQQQQQQQQQQQQQHQQQQQQQAAVHAAQHGAHATHAEISGATVMEIDPSQIKNEPGMIITPEIVNMMSTGHMDMYNSDTSEDSMMIANGSPHDQNEPHYTNLDQQHGGLGQFNGPKAWTQDDMNSALDALKNQNMSLTKASAIYGIPSTTLWQRAHRLGIETPKKEGGTKSWNEDALQNALEALRSGQISANKASKAFGIPSSTLYKIARREGIRLAAPFNAAPTTWTPEDLERALEAIRAGNTSVQKASAEFGIPTGTLYGRCKREGIELSRSNPTPWSEDAMNEALNSVRVGQMSINQAAIHYNLPYSSLYGRFKRGKYDVVANTSGVSLNNTSGNTTGSIEIIEHSQENSLHMLQQQFPYSPSPHPPTPQHHSTPQHHSSQQGPPTPQHMQQHVVHMQQQSPHQAHHQQQQQQQQQQQQQQHMQQQQDVVTSSSQVVHGQQQQQQLQQIYQHHGTPERS
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_00470787;
- 90% Identity
- iTF_00803519;
- 80% Identity
- -