Basic Information

Insect: Drosophila innubila
Gene Symbol: br
Assembly: GCA_004354385.1
Location: NW:14644127-14698934[+]

Transcription Factor Domain

TF Family: HTH
Domain: HTH_psq domain
PFAM: PF05225
TF Group: Helix-turn-helix
Description: This DNA-binding motif is found in four copies in the pipsqueak protein of Drosophila melanogaster [1]. In pipsqueak this domain binds to GAGA sequence [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 4 7.1e-12 1.6e-08 33.7 0.0 1 40 695 735 695 738 0.90

2 4 3.9e-14 8.6e-11 40.9 0.1 2 39 750 787 749 790 0.94

3 4 9.2e-18 2e-14 52.6 0.0 1 45 804 849 804 849 0.98

4 4 9.3e-20 2e-16 59.0 0.0 1 43 856 899 856 900 0.97

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	4	7.1e-12	1.6e-08	33.7	0.0	1	40	695	735	695	738	0.90
2	4	3.9e-14	8.6e-11	40.9	0.1	2	39	750	787	749	790	0.94
3	4	9.2e-18	2e-14	52.6	0.0	1	45	804	849	804	849	0.98
4	4	9.3e-20	2e-16	59.0	0.0	1	43	856	899	856	900	0.97

Sequence Information

Coding Sequence: ATGGCTGCCGTGCGGGGTCATCAGTACTTTAGTCTGCGATGGAATAACTATCAAAACACAATGACGTCAGTGTTTCAGCAGTTGCGAGAGGATCTCTCCTTTGTCGATGTGACCTTGTCCTGCGAGCATGGCTCTCTCAAGGCGCACAAGGTCGTGCTCTCCGCCTGctcaacatattttcaaaagcttcTGCTCGAGAATCCATGCAAACATCCAACAATTATTTTACCCGCCGATATCATATTCACAGACCTAAAAACGATTATCGATTTTGTGTATCGCGGCGAAATCGATGTCACCGAATCGGACTTACAGGGTCTGTTACGCACCGCAGAACAGTTGAAAATCAAAGGACTCTGTGAGCCGGCTGAGAATGCGGATGATTTGAATGACGCTGCATCGGCGACGATAACCGTGTCGGAGAATATACAACAGGCGGTTGTTGGCAATATTGTGAATGCGAGCCTAGTGCCCGGCGCGCCCTCGCCCACAatcgagcagcagcagcaacaccatcagcagcagcaacaggcacagcagcaacaggagcatcagcagcaggtgcaacaacagcagctggtgAACAGTGCATTGTTGGCACAGCATAGTCTTGCAACAAATAGTGGCATACAACTGGCCAATGCGGCTGGGCAACAGCTGCTGAGCAACACAAGTGGCAGCAGTAGCAgtctgcaacagttgcaacagcaacagcagcagcagcaacaacagcaacagttgcagccaACGCCGCGTAAGTCGCGTTTGCGTAAACGTTCGAAATCGCCAGATTTGCAACTAGGTGGCAACGCCACAGGTCAACAACCACAGCCAGCAcatcaccaacaacaacaacagcagcaacaacaacagcagcagcaatcacaacagcaacaacaacatcatcatccacAAACGATACTCATTCAGGGACAAAATCAAACATCGATCGTGAGTCTGCAGCAAACAGCAGAGGGCAATTATATTCCCGTTACGACGACGCCTGGCGACGATTCCGATAGCGATAATAAGCCGCAAAAGATTTGCAAAACAGAACAATCGGTGGCCTCGCCGGCATCCAACTCGTCCACATCGAATAATGCCGCTTCTGGCGTGAGCGGCCAAGCGATTGTGACACAAATTGTAGTAGCGCGCGACggaaaagataataaaatgacTAGTTTAGGCATGGGCATGAACGGCGGTCTGTTGGGCGTGCCCATGGGATTTCTGGACTTTACACCGGAGCCACCAGCACCATCGGCCACACCAGTCACCGTAACGGAACATGTCGATCTATCGTGCAACCCCAGTACCGATACACGCGATCTATCAAATCCCACCGAACCGCTTGACATAGACAATCATTTGGCTCAGCAAATCCATCGGCTCGATCAATCTCCCATGCATTCAATATCGCATCATCATACAACTGGCGACGAGAGCAACTCGAATCTGGTGCAGCATATCAAAAGTGAAGTAATCGAGGCCAAGCATTTGGCgcatgtgcaacaacaacaacaacagcagcagcagcaacagcagcagcaacaacaacagcaacagcagcagcaacatgcacatcatcatcagcatttgCACGCTCAACAATTGTTGGCGCAAagtcagcaacagcaacagcagcaacaacatcagcagcaacagcagcaacaacagcagcagcaacaacaacaacagcagcagcaacagcaggcaGCAGTGCATGGACAGCATGGCACGCATGCAACACATGCGGAAATCAGTGGTGCCACTGTCATGGAGATTGATCCGAGCCAGATCAAGCATGAGCCGGGCATGATAATAACGCCAGAGATTGTCAATATGATGTCAACTGGGCATATGGACATGTACAACTCGGATACGAGCGAGGACTCAATGATGATCGCCAACGGTTCGCCGCACGATCAAAATGAGCCGCATTATACGAATTTGGATCAGCAACACGGCGGCCTGGGTGGCAGCGTTTGCGGCCCCGGCGccggtggtgttggtggtggtggcggcattggtggtggtggtagtGCTGGCGAGAAAGGTCAGTTTAATGGTCCCAAAGCTTGGACACAAGATGATATGAATTCAGCTTTAGATGCATTAAAGAATCAAAACATGAGCCTGACGAAAGCATCTGCCATTTATGGCATACCATCAACGACATTATGGCAGCGTGCACATCGTTTGGGCATCGAAACGCCTAAGAAGGAGGGCGGCACCAAATCATGGAACGAGGATGCATTACAGAATGCCTTGGAGGCACTGCGATCGGGTCAAATATCGGCAAATAAAGCATCAAAAGCGTTTGGTATACCCTCATCGACGCTCTACAAGATAGCGCGTCGGGAGGGCATACGGCTGGCGGCGCCATTCAATGCCGCACCAACCACGTGGACACCCGAGGATTTGGAGCGTGCATTGGAGGCGATACGTGCCGGTAATACGTCTGTGCAAAAAGCAAGTGCTGAATTTGGCATACCGACAGGAACACTTTATGGACGCTGCAAACGGGAGGGCATCGAATTATCGCGTTCAAATCCAACACCTTGGTCCGAGGATGCCATGAACGAGGCATTGAACTCAGTGCGCGTTGGCCAAATGTCCATCAATCAGGCGGCCATACATTACAACCTGCCCTACAGTTCGCTTTATGGGCGCTTCAAGCGCGGCAAATACGATGTTGTGGCAAATACCAGTGGCGTATCGCTGATGAACACATCGGGCAACACGACCGGCAGCATTGAGATTATCGAGCATAGTCAGGAGAATTCGTTGCatatgttgcagcaacagttCCCGTACAGTCCGTCGCCGCATCCGCCGACGCCGCAGCATCACAGTACACCGCAGCACCACAGTTCGCAGCAGGGGCCACCGACGCCACAGCATATGCAACAGCATGTGGTGCACATGCAACAGCAGTCGCCACACCAGGCgcatcatcaacaacagcagcaacagcagcaacagcaacagcacttgcaacagcagcagcaacaggatgTGGTAACATCGAGTAGCCAAGTGGTGCacagccagcaacaacaacagcagcttcaACAGATCTATCAGCATCACGGCACGCCCGAGCGTAGTTGA
Protein Sequence: MAAVRGHQYFSLRWNNYQNTMTSVFQQLREDLSFVDVTLSCEHGSLKAHKVVLSACSTYFQKLLLENPCKHPTIILPADIIFTDLKTIIDFVYRGEIDVTESDLQGLLRTAEQLKIKGLCEPAENADDLNDAASATITVSENIQQAVVGNIVNASLVPGAPSPTIEQQQQHHQQQQQAQQQQEHQQQVQQQQLVNSALLAQHSLATNSGIQLANAAGQQLLSNTSGSSSSLQQLQQQQQQQQQQQQLQPTPRKSRLRKRSKSPDLQLGGNATGQQPQPAHHQQQQQQQQQQQQQSQQQQQHHHPQTILIQGQNQTSIVSLQQTAEGNYIPVTTTPGDDSDSDNKPQKICKTEQSVASPASNSSTSNNAASGVSGQAIVTQIVVARDGKDNKMTSLGMGMNGGLLGVPMGFLDFTPEPPAPSATPVTVTEHVDLSCNPSTDTRDLSNPTEPLDIDNHLAQQIHRLDQSPMHSISHHHTTGDESNSNLVQHIKSEVIEAKHLAHVQQQQQQQQQQQQQQQQQQQQQQHAHHHQHLHAQQLLAQSQQQQQQQQHQQQQQQQQQQQQQQQQQQQQAAVHGQHGTHATHAEISGATVMEIDPSQIKHEPGMIITPEIVNMMSTGHMDMYNSDTSEDSMMIANGSPHDQNEPHYTNLDQQHGGLGGSVCGPGAGGVGGGGGIGGGGSAGEKGQFNGPKAWTQDDMNSALDALKNQNMSLTKASAIYGIPSTTLWQRAHRLGIETPKKEGGTKSWNEDALQNALEALRSGQISANKASKAFGIPSSTLYKIARREGIRLAAPFNAAPTTWTPEDLERALEAIRAGNTSVQKASAEFGIPTGTLYGRCKREGIELSRSNPTPWSEDAMNEALNSVRVGQMSINQAAIHYNLPYSSLYGRFKRGKYDVVANTSGVSLMNTSGNTTGSIEIIEHSQENSLHMLQQQFPYSPSPHPPTPQHHSTPQHHSSQQGPPTPQHMQQHVVHMQQQSPHQAHHQQQQQQQQQQQHLQQQQQQDVVTSSSQVVHSQQQQQQLQQIYQHHGTPERS

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: iTF_00470787;
90% Identity: iTF_00519079;
80% Identity: iTF_00523040;