Dput011895.2
Basic Information
- Insect
- Drosophila putrida
- Gene Symbol
- -
- Assembly
- GCA_037043535.1
- Location
- JBAMBI010000472.1:1655655-1666327[+]
Transcription Factor Domain
- TF Family
- HTH
- Domain
- HTH_psq domain
- PFAM
- PF05225
- TF Group
- Helix-turn-helix
- Description
- This DNA-binding motif is found in four copies in the pipsqueak protein of Drosophila melanogaster [1]. In pipsqueak this domain binds to GAGA sequence [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 4 1.2e-11 2e-08 33.8 0.0 1 40 624 664 624 667 0.90 2 4 6.6e-14 1.1e-10 41.1 0.1 2 39 679 716 678 719 0.94 3 4 1.5e-17 2.5e-14 52.7 0.0 1 45 733 778 733 778 0.98 4 4 1.6e-19 2.6e-16 59.1 0.0 1 43 785 828 785 829 0.97
Sequence Information
- Coding Sequence
- ATGGAAGGTGGAGGGTGGAAGTTCCCCATTCTATACAGCTCAACCGACTCCCCGCCCACTGCCACTCTCCCGCCCACTCCCTTCAACCGTCGTTGCCCATTTGCCAACTGGGCTGGTCTTTTACGCACCGCGGAGCAACTGAAAATCAAAGGACTCTGTGAGCCGGCTGAGAATGCGGATGATTTGAATGACGCTGCATCGGCGACGATAACCGTGTCGGAGAACATACAACAGGCGGTTGTTGGGAACATTGTGAATGCCAGCCTAGTTGCCGGTGCGCCCTCGCCAACaatcgagcagcagcagcaacatcatcagcagcaacaggcacagcaacaacagcagcagcaggagcatcaacagcaggtgcaacaacagcagctggtaAACAGTGCATTGTTGGCACAGCATAGTCTTGCAACAAATAGTGGCATACAATTGGCAAATGCGGCTGGGCAACAGCTGTTGACCAACACAACTGGCAGCAGTAGCAgtctgcaacagttgcaacagcaacaacagcagcagcaacagttgcagccaACGCCGCGTAAATCACGATTGCGTAAACGCTCCAAATCCCCAGATTTGCAACTAGGTGGCAACGCCTCCGGGCAACAACCACAGCCGgcacatcatcagcaacagcagcaacagcaacagcagcaacaacaacaatcacatcaacaacatcatcatccacAAACGATACTCATTCAGGGACAAAATCAAACATCGATTGTGAGTCTACAGCAAACAGCAGACGGCAATTATATACCCGTATCGACGGCTGGCGACGATTCCGATAGCGATAATAAACCGCAAAAGATTTGCAAGACAGAACAATCGGTTGCATCGCCGGCATCCAATTCGTCGACATCGAATAATGCCGCTGCTGGCGTGAGCGGCCAAGCGATTGTGACACAAATTGTAGTAGCGCGCGACGgaaaagataataaaatgaCTAGTTTAGGCATGGGCATGAACGGCGGTCTGTTGGGCGTGCCCATGGGATTTCTGGACTTTACACCGGAGCCACCAGCACCATCGGCCACACCAGTCACCGTAACGGAACATGTCGATCTATCGTGCAACCCCAGCACCGATACACGCGATCTATCAAATCCCACCGAACCGCTCGACATAGACAATCATTTGGCTCAGCAAATCCATCGGCTCGATCAATCTCCCATGCACTCAATAGCGCATCATCATACAACCGGCGACGAGAGCAACTCGAATCTGGTGCAGCATATCAAAAGCGAAGTGATTGAGGCCAAGCATTTGGCGcatgtgcaacagcagcagcaacagcaacaacagcagcagcagcagcaacaacaacaacaacagcagcagcaacagcaacatgcacatcatcatcagcatttgCACGCTCAGCAATTGCTGGCGCAaagtcagcaacagcaacagcaacatcaacaacagcagcaacaacaacagcagcaacaacaacagcagcaacaacagcaggcagCGGTGCATGCACAGCATGCAACGCATGCCACACATGCGGAAATCAGTGGCGCCACTGTCATGGAGATTGATCCGAGCCAGATCAAGCATGAGCCGGGCATGATAATAACGCCAGAGATTGTCAATATGATGTCCAGTGGACATATGGACATGTACAACTCGGATACGAGCGAGGACTCAATGATGATCGCGAACGGTTCGCCGCACGATCAAAATGAGCCGCATTATACGAATTTGGATCAGCAACACGGCGGCCTGGGTGGCAGTGTTTGTGGCCCCGGCGccggtggtgttggtggtggtggcggtggcggcattggtggtggtggtaatGCTGGCGAGAAAGGTCAGTTTAATGGTCCCAAAGCTTGGACACAAGATGATATGAATTCAGCTTTAGATGCATTAAAGAATCAAAACATGAGCCTGACGAAAGCATCTGCCATTTATGGCATACCATCAACGACATTATGGCAGCGTGCACATCGTTTGGGCATCGAAACGCCTAAGAAGGAGGGTGGCACCAAATCCTGGAACGAGGATGCCTTACAGAATGCCTTGGAGGCACTGCGATCGGGACAGATATCGGCTAACAAAGCATCGAAAGCGTTTGGTATACCCTCATCGACGCTCTACAAGATAGCGCGTCGGGAGGGCATACGGCTGGCGGCGCCATTCAATGCCGCACCAACCACGTGGACACCCGAGGATTTGGAGCGTGCATTGGAGGCGATACGGGCCGGCAATACGTCTGTGCAAAAAGCGAGTGCTGAATTTGGCATACCCACAGGAACACTTTATGGACGCTGCAAACGGGAGGGCATCGAATTATCGCGTTCGAATCCAACACCTTGGTCCGAGGATGCCATGAACGAGGCATTGAACTCAGTGCGCGTTGGTCAAATGTCCATCAATCAGGCGGCCATACACTACAACCTGCCCTACAGTTCACTTTATGGGCGCTTTAAGCGCGGCAAATACGATGTTGTGGCAAATACCAGTGGCGTCTCGCTAATGAACACATCGGGCAACACGACCGGCAGCATTGAGATTATCGAGCATAGTCAGGAGAATTCGttgcatatgttgcagcaacaattcCCGTACAGTCCATCGCCGCATCCGCCGACGCCGCAACATCATAGTACACCGCAGCACCACAGTTCACAGCAGGGGCCACCGACGCCACAGCATATGCAACAGCATGTGGtgcacatgcaacaacagtCGCCACATCAGGcgcatcatcaacagcagcagcagcaacaacatttgcagcagcagcaacaacaagatgtGGTAACATCAAGTAGCCAAGTGGTGCatagccagcaacaacagcaacaacagcagcagcaacagcagcttcaACAGATCTATCAGCATCACGGAACGCCAGAGCGTAGTTGA
- Protein Sequence
- MEGGGWKFPILYSSTDSPPTATLPPTPFNRRCPFANWAGLLRTAEQLKIKGLCEPAENADDLNDAASATITVSENIQQAVVGNIVNASLVAGAPSPTIEQQQQHHQQQQAQQQQQQQEHQQQVQQQQLVNSALLAQHSLATNSGIQLANAAGQQLLTNTTGSSSSLQQLQQQQQQQQQLQPTPRKSRLRKRSKSPDLQLGGNASGQQPQPAHHQQQQQQQQQQQQQSHQQHHHPQTILIQGQNQTSIVSLQQTADGNYIPVSTAGDDSDSDNKPQKICKTEQSVASPASNSSTSNNAAAGVSGQAIVTQIVVARDGKDNKMTSLGMGMNGGLLGVPMGFLDFTPEPPAPSATPVTVTEHVDLSCNPSTDTRDLSNPTEPLDIDNHLAQQIHRLDQSPMHSIAHHHTTGDESNSNLVQHIKSEVIEAKHLAHVQQQQQQQQQQQQQQQQQQQQQQQQHAHHHQHLHAQQLLAQSQQQQQQHQQQQQQQQQQQQQQQQQQAAVHAQHATHATHAEISGATVMEIDPSQIKHEPGMIITPEIVNMMSSGHMDMYNSDTSEDSMMIANGSPHDQNEPHYTNLDQQHGGLGGSVCGPGAGGVGGGGGGGIGGGGNAGEKGQFNGPKAWTQDDMNSALDALKNQNMSLTKASAIYGIPSTTLWQRAHRLGIETPKKEGGTKSWNEDALQNALEALRSGQISANKASKAFGIPSSTLYKIARREGIRLAAPFNAAPTTWTPEDLERALEAIRAGNTSVQKASAEFGIPTGTLYGRCKREGIELSRSNPTPWSEDAMNEALNSVRVGQMSINQAAIHYNLPYSSLYGRFKRGKYDVVANTSGVSLMNTSGNTTGSIEIIEHSQENSLHMLQQQFPYSPSPHPPTPQHHSTPQHHSSQQGPPTPQHMQQHVVHMQQQSPHQAHHQQQQQQQHLQQQQQQDVVTSSSQVVHSQQQQQQQQQQQQLQQIYQHHGTPERS
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_00470787;
- 90% Identity
- iTF_00519079;
- 80% Identity
- -