Dimm002367.2
Basic Information
- Insect
- Drosophila immigrans
- Gene Symbol
- -
- Assembly
- GCA_963583835.1
- Location
- OY757141.1:20419254-20436541[+]
Transcription Factor Domain
- TF Family
- HTH
- Domain
- HTH_psq domain
- PFAM
- PF05225
- TF Group
- Helix-turn-helix
- Description
- This DNA-binding motif is found in four copies in the pipsqueak protein of Drosophila melanogaster [1]. In pipsqueak this domain binds to GAGA sequence [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 4 3.2e-11 4.7e-08 32.6 0.0 1 40 573 613 573 616 0.90 2 4 6.9e-14 1e-10 41.1 0.1 2 39 628 665 627 668 0.94 3 4 1.6e-17 2.3e-14 52.8 0.0 1 45 682 727 682 727 0.98 4 4 1.4e-19 2.1e-16 59.3 0.0 1 43 734 777 734 778 0.96
Sequence Information
- Coding Sequence
- ATGGCACGTTTCGAGGGTCTGCTGCGCACCGCGGAACAGTTGAAAATCAAAGGACTCTGCGAGCCGGCTGAGAATGCGGATGATCTGAATGACGCTGCATCGGCGACGATAACCGTGTCGGAGAACATACAACAGACGGTCGCTGGGAACATTGTGAACGCGAGCCTTGTGCCCGGCGCTCCCTCGCCCAccatcgagcagcagcaacagcatcaccagcagcaacaggcacagcagcagcaacagcaacagcagcaacaacagcagcagcagcaggagcatcaacagcaggtgcaacagcagcagctggtgaACAGTGCGTTGCTGGCACAGCACAGTCTTGCAACAAACAGTGGCATACAGTTGGCCAGTGGGGCCGGGCAACAGCTGTTGAGCAACTCGAGtggcaccagcagcagcctgcaacagttgcaacagcagcaacaacagcagcagcagcaacaacaacagttgcagccAACGCCGCGTAAGTCGCGACTGCGTAAACGTTCCAAGTCGCCAGATTTGCAACTGGGTGGCAACGTCGCAgggcaacaaccacaaccggcgcaccatcaacagcagcagcaacaacagcagcagcaacagcagcaacatcatcaacaacatcatccGCAAACGATACTCATTCACGGCCAGAATCAAACATCGATCGTGAGTCTGCAGCAAACAGCCGACGGCAATTATATACCAGTTACGGCTGGCGACGATTCCGATAGCGACAATAAGCCGCAAAAGATCTGCAAGACAGAGCAATCGGTGGCCTCGCCGGCATCCAACTCGTCCACATCGAATAATGCCGCATCTGGCGTGAGCGGCCAAGCGATTGTGACACAAATTGTAGTAGCGCGCGACGGAAAAGATAATAAAATGACTAGTTTAGGCATGGGCATGAACGGCGGTCTGTTAAGCGTGCCCATGGGATTTCTGGACTTTACACCGGAACCACCAGCACCATCGGCCACACCAGTCACCGTTACGGAACACGTCGATCTATCGTGCAACCCCAGCACCGATACACGCGATCTATCAAATCCCACCGAACCGCTCGACATAGACAATCATTTGGCTCAGCAAATCCATCGGCTCGATCAATCTCCCATGCACTCGATAGCGCACCATCATACGACTGGCGACGAGAGCAACTCGAATCTGGTGCAGCATATCAAAAGCGAAGTGATTGAGGCCAAGCACCTGGCGCATGTCCAagcccagcagcaacaacagcaacagcagcaacaacagcagcaacagcaacaacagcagcagcaacatcagcaacatgcacatcatcatcagcatttgCACGCTCAGCAATTGTTGGCGCAaagtcagcaacagcaacagcagcagcagcaacaacaacagcagcagcagcaacagcaacatcagcagcaacagcagcaggcagcggTGCATGCACAGCATGCCACGCACGCTGCACATGCGGAAATTAGTGGCGCCACTGTCATGGAGATTGATCCGAGCCAGATCAAGCATGAGCCGGGCATGATAATAACGCCAGAGATTGTCAATATGATGTCCACTGGGCATATGGacATGTACAACTCGGATACGAGCGAGGACTCAATGATGATCGCGAACGGTTCGCCGCACGATCAGAATGAGCCGCATTATACGAATTTGGATCAGCAGCACGGCGGCCTGGGTCAGTTTAATGGTCCCAAAGCTTGGACACAAGATGATATGAATTGCGCTTTAGATGCATTAAAGAATCAAAACATGAGCCTGACGAAAGCATCTGCCATTTATGGCATACCATCAACGACCTTATGGCAGCGTGCTCATCGCTTGGGCATCGAAACGCCTAAGAAGGAGGGCGGCACCAAATCGTGGAACGAGGATGCACTGCAGAACGCGCTGGAGGCGCTGCGTTCGGGACAAATATCGGCGAATAAAGCATCGAAAGCGTTTGGTATTCCCTCATCGACGCTCTACAAGATAGCGCGTCGGGAGGGCATACGGCTGGCGGCGCCATTCAATGCCGCACCAACCACGTGGACCCCCGAGGACTTGGAGCGTGCATTGGAGGCGATACGCGCCGGCAATACGTCGGTGCAAAAAGCCAGTGCCGAATTCGGCATACCCACAGGAACACTTTATGGACGCTGCAAACGGGAGGGCATCGAACTGTCGCGTTCGAATCCAACACCTTGGTCCGAGGATGCCATGAACGAGGCATTGAACTCAGTGCGCGTTGGCCAAATGTCCATCAATCAGGCGGCCATACATTATAACCTGCCCTACAGCTCGCTCTATGGGCGCTTCAAGCGCGGCAAATACGACGTTACGGCCAATACCAGCGGCGTCTCACTGATGAACACTTCGGGCAACACAACAGGCAGCATTGAGATTATTGAACACAGTCAGGAGAATTCGttgcatatgttgcagcaacagttCCCGTACAGTCCGTCGCCGCATCCGCCGACGCCGCAGCATCATAGCACACCGCAACATCATAGCACACCGCAGCACCACAGCTCGCAGCAGGGGCCGCCGACGCCACAGCACATGCAACAGCACGTGGTGCAcatgcagcagcagtcgccgcATCAGGCGcaccatcaacaacagcagcagcagcagcaacaacagcagcaacagcagcagcagcacatgcaacagcaacaggatgTGGTAACATCGAGCAGCCAAGTGGTGCAcagtcagcaacaacaacagcagcttcaGCAGATCTATCAGCATCACGGCACGCCCGAGCGTAGTTGA
- Protein Sequence
- MARFEGLLRTAEQLKIKGLCEPAENADDLNDAASATITVSENIQQTVAGNIVNASLVPGAPSPTIEQQQQHHQQQQAQQQQQQQQQQQQQQQEHQQQVQQQQLVNSALLAQHSLATNSGIQLASGAGQQLLSNSSGTSSSLQQLQQQQQQQQQQQQQLQPTPRKSRLRKRSKSPDLQLGGNVAGQQPQPAHHQQQQQQQQQQQQQHHQQHHPQTILIHGQNQTSIVSLQQTADGNYIPVTAGDDSDSDNKPQKICKTEQSVASPASNSSTSNNAASGVSGQAIVTQIVVARDGKDNKMTSLGMGMNGGLLSVPMGFLDFTPEPPAPSATPVTVTEHVDLSCNPSTDTRDLSNPTEPLDIDNHLAQQIHRLDQSPMHSIAHHHTTGDESNSNLVQHIKSEVIEAKHLAHVQAQQQQQQQQQQQQQQQQQQQQHQQHAHHHQHLHAQQLLAQSQQQQQQQQQQQQQQQQQQHQQQQQQAAVHAQHATHAAHAEISGATVMEIDPSQIKHEPGMIITPEIVNMMSTGHMDMYNSDTSEDSMMIANGSPHDQNEPHYTNLDQQHGGLGQFNGPKAWTQDDMNCALDALKNQNMSLTKASAIYGIPSTTLWQRAHRLGIETPKKEGGTKSWNEDALQNALEALRSGQISANKASKAFGIPSSTLYKIARREGIRLAAPFNAAPTTWTPEDLERALEAIRAGNTSVQKASAEFGIPTGTLYGRCKREGIELSRSNPTPWSEDAMNEALNSVRVGQMSINQAAIHYNLPYSSLYGRFKRGKYDVTANTSGVSLMNTSGNTTGSIEIIEHSQENSLHMLQQQFPYSPSPHPPTPQHHSTPQHHSTPQHHSSQQGPPTPQHMQQHVVHMQQQSPHQAHHQQQQQQQQQQQQQQQQHMQQQQDVVTSSSQVVHSQQQQQQLQQIYQHHGTPERS
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_00470787;
- 90% Identity
- iTF_00803519;
- 80% Identity
- -