Dbas007393.1
Basic Information
- Insect
- Drosophila basisetae
- Gene Symbol
- -
- Assembly
- GCA_035041595.1
- Location
- JAWNLB010000144.1:7327843-7334042[+]
Transcription Factor Domain
- TF Family
- HTH
- Domain
- HTH_psq domain
- PFAM
- PF05225
- TF Group
- Helix-turn-helix
- Description
- This DNA-binding motif is found in four copies in the pipsqueak protein of Drosophila melanogaster [1]. In pipsqueak this domain binds to GAGA sequence [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 4 1.5e-11 1.7e-08 33.9 0.0 1 40 596 636 596 639 0.90 2 4 8.2e-14 9.4e-11 41.1 0.1 2 39 651 688 650 691 0.94 3 4 1.9e-17 2.2e-14 52.7 0.0 1 45 705 750 705 750 0.98 4 4 1.9e-19 2.2e-16 59.1 0.0 1 43 757 800 757 801 0.97
Sequence Information
- Coding Sequence
- ATGCAAAGGGATGGAAAAAGAGGTCTGCTGCGCACCGCGgaacaattgaaaatcaagGGTCTCTGTGAGCCGGCTGAGAATACGGATGATTTAAATGACGCGGCTTTGGCGACAATAACCGTATCGGAGAACATACAGCAGGCGGTTGTTGGCAACATTGTGAATGCGAGCATAGTGCCCGGTGCGCCCTCGCCCACgatcgagcagcagcagcagcatcatcagcagcagcagcagcaacagcaacaacagcagcaacatcagcaggaacaccagcagcaggtgcagcagcagcagctggtcaACAGTGCTTTGCTGACACAGCATACGCTTGCAACAAACAGTGGCATACAGTTGGCCAACGCGGCTGGGCAACAGCTGCTGAGCAATACAagcggcagcagtagcagtctgcagcagttgcagcagcaacagcagcagcagcagcagcaacagttgcagccaACGTCGCGTAAATCGCGAGTGCGAAAACGCTCGAAAACGCCTGATTTGCAACTGGGTGGCAACGCCGTCGTTCAACAACCACAGCCGGctcaccatcagcagcagcagcaacacaaccaacaacaacaacaacagcaccaacaacaacaacagcagcagcagcaacatcaacaacaacaacaccatcaTCCGCAAACGATACTCATCCAGGGACAGAATCAAACATCGATCGTGAGTCTACAGCAGACGGCAGACGGCAATTATATACCCGTTGGGTCCGCTGGCGACGATTCCGATAGCGATAATAAGCCGCAAAAGATTTGCAAGACAGAGCAATCGGTGGCCTCGCCGGCATCCAACTCGTCCACATCGAATAATGCAGCGGGCGTGAGCGGCCAGGCGATTGTGACACAAATTGTAGTAGCGCGCGACggaaaagataaaaatatgaCTAGTTTAGGCATGGGCATGAACGGCGGTCTGTTGGGCGTGCCCATGGGCTTTCTGGACTTTACACCGGAACCACCAGCACCATCAGCCACACCAGTCACCGTTACGGAACACGTCGATCTATCGTGCAACCCCAGCACCGATACACGCGATCTATCAAATCCCACCGAACCGCTCGACATTGACAATCATTTGGCTCAGCAAATCCATCGGCTCGATCAATCTCCCATGCACTCAATAGCGCATCATCATGCAACCGGCGACGAGAGTAACTCGAATATGGTGCAGCATATCAAAAGCGAGGTGATTGAGGCCAAGCACTTGGCTCATGTAcaagcgcaacagcaacagcagcaacagcagcaacagcagcagcagcagcagcagcagcaacagcagcaacaacaacagcagcaacagcagcaacagcagcagcagcaacagcaacaacaacagcagcagcaacaacatgcacatcatcatcatcagttgCACGCTCAGCAACTGTTGGCCcagagtcagcagcagcagcagcagcaacaacaacaacagcaacaccaacaacagcagcagcagcagcaggcggtgCATGCCGCACAGCATGCAGCGCATGCCACACATGCGGAAATCAGCGGCGCCACTGTCATGGAGATTGATCCGAGCCAGATTAAGAATGAGCCGGGCATGATTATAACGCCAGAGATTGTCAATATGATGTCCACCGGGCATATGGACATGTACAACTCGGATACGAGCGAGGACTCAATGATGATCGCGAACGGTTCGCCGCACGATCAGAATGAGCCGCATTACACGAATTTGGATCAGCAGCACGGCGGACTGGGTCAGTTTAATGGTCCCAAAGCTTGGACACAAGATGATATGAATTCAGCTTTAGATGCATTAAAGAATCAAAACATGAGCCTGACGAAAGCATCTGCCATTTATGGCATACCATCAACGACCTTATGGCAGCGAGCACACCGTTTGGGCATCGAAACGCCTAAGAAGGAGGGCGGCACCAAATCGTGGAACGAGGACGCCCTGCAAAATGCCTTGGAGGCGTTGCGTTCGGGTCAAATATCGGCGAATAAAGCATCGAAAGCGTTTGGTATTCCCTCATCGACGCTGTACAAGATTGCGCGTCGCGAGGGCATACGGCTGGCGGCGCCATTCAATGCCGCACCAACCACGTGGACACCCGAGGATCTGGAGCGTGCATTGGAGGCGATACGCGCCGGCAACACCTCTGTACAAAAAGCAAGTGCCGAATTCGGCATACCGACAGGAACACTTTATGGACGCTGCAAACGGGAGGGCATCGAACTGTCGCGTTCGAATCCAACGCCCTGGTCTGAGGATGCTATGAACGAGGCATTGAACTCGGTGCgCGTTGGCCAGATGTCCATCAACCAGGCGGCCATACACTACAACCTGCCCTACAGTTCGCTCTACGGACGATTCAAGCGTGGCAAGTACGATGTGGTTGCCAATACCAGTGGCGTCTCGCTGAACAACACCTCCGGCAATACGACCGGCAGCATTGAGATTATCGAGCATAGTCAGGAGAATTCGttgcatatgttgcagcaacagttcCCGTACAGTCCGTCGCCACATCCGCCGACGCCACAGCATCATAGTACGCCGCAGCATCACAGTTCGCAGCAGGGGCCGCCGACGCCGCAGCATATGCAACAGCATGTGGtgcacatgcaacagcagtcgcCACACCAGGCGcaccatcaacagcagcaacagcaacagcagcagcaacagcagcagcagcagcacatgcagcagcaacaggatgTGGTCACATCAAGCAGCCAAGTGGTGCatagccagcaacagcagcagcagcttcagcagATCTATCAGCATCACGGCACGCCCGAGCGCAGTTGA
- Protein Sequence
- MQRDGKRGLLRTAEQLKIKGLCEPAENTDDLNDAALATITVSENIQQAVVGNIVNASIVPGAPSPTIEQQQQHHQQQQQQQQQQQQHQQEHQQQVQQQQLVNSALLTQHTLATNSGIQLANAAGQQLLSNTSGSSSSLQQLQQQQQQQQQQQLQPTSRKSRVRKRSKTPDLQLGGNAVVQQPQPAHHQQQQQHNQQQQQQHQQQQQQQQQHQQQQHHHPQTILIQGQNQTSIVSLQQTADGNYIPVGSAGDDSDSDNKPQKICKTEQSVASPASNSSTSNNAAGVSGQAIVTQIVVARDGKDKNMTSLGMGMNGGLLGVPMGFLDFTPEPPAPSATPVTVTEHVDLSCNPSTDTRDLSNPTEPLDIDNHLAQQIHRLDQSPMHSIAHHHATGDESNSNMVQHIKSEVIEAKHLAHVQAQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQHAHHHHQLHAQQLLAQSQQQQQQQQQQQQHQQQQQQQQAVHAAQHAAHATHAEISGATVMEIDPSQIKNEPGMIITPEIVNMMSTGHMDMYNSDTSEDSMMIANGSPHDQNEPHYTNLDQQHGGLGQFNGPKAWTQDDMNSALDALKNQNMSLTKASAIYGIPSTTLWQRAHRLGIETPKKEGGTKSWNEDALQNALEALRSGQISANKASKAFGIPSSTLYKIARREGIRLAAPFNAAPTTWTPEDLERALEAIRAGNTSVQKASAEFGIPTGTLYGRCKREGIELSRSNPTPWSEDAMNEALNSVRVGQMSINQAAIHYNLPYSSLYGRFKRGKYDVVANTSGVSLNNTSGNTTGSIEIIEHSQENSLHMLQQQFPYSPSPHPPTPQHHSTPQHHSSQQGPPTPQHMQQHVVHMQQQSPHQAHHQQQQQQQQQQQQQQQHMQQQQDVVTSSSQVVHSQQQQQQLQQIYQHHGTPERS
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_00470787;
- 90% Identity
- iTF_00803519;
- 80% Identity
- -