Dcon009329.1
Basic Information
- Insect
- Drosophila conformis
- Gene Symbol
- -
- Assembly
- GCA_035041375.1
- Location
- JAWNLE010000862.1:6674023-6689827[+]
Transcription Factor Domain
- TF Family
- HTH
- Domain
- HTH_psq domain
- PFAM
- PF05225
- TF Group
- Helix-turn-helix
- Description
- This DNA-binding motif is found in four copies in the pipsqueak protein of Drosophila melanogaster [1]. In pipsqueak this domain binds to GAGA sequence [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 4 1.2e-11 1.9e-08 33.9 0.0 1 40 579 619 579 622 0.90 2 4 6.8e-14 1e-10 41.1 0.1 2 39 634 671 633 674 0.94 3 4 1.6e-17 2.4e-14 52.8 0.0 1 45 688 733 688 733 0.98 4 4 1.7e-19 2.6e-16 59.1 0.0 1 43 740 783 740 784 0.97
Sequence Information
- Coding Sequence
- ATGGCACGTTTTGAGGGTCTGCTGCGCACCGCGgaacaattgaaaatcaaaggTCTTTGTGAGCCGGCTGAGAATGCGGATGACTTAAATGAAGCGGCTTTGGCGACAATAACCGTATCGGAGAACATACAGCAGGCGGTTGTTGGCAACATTGTGAATGCGAGCATAGTGCCCGGTGCGCCCTCGCCCACGatcgaacagcagcagcagcagcaacagcagcagcatcatcaacagcaacagcagcaacatcagcaggagcatcagcagcagcagcagcaggtgcaacagcagcagctgatcaaCAGTGCTTTGCTGACACAGCATACGCTTGCAACAAACAGTGGCATACAATTGGCCAACGCGGCtgggcaacagctgctgagCAATACAagcggcagcagtagcagcctgcaacagttgcagcagcagcagcagcaacagttgcagccaGCGACGCGCAAGTCGCGAGTGCGTAAACGTTCGAAAACGCCAGATTTGCAACTGGGTGGCAACAACGCCATcgtacaacaaccacagccggctcaccatcagcagcagcaacagcagcaacacaaccaacaacaacaacaacagcagcaacagcaacaacaacaacatcatcatccgCAAACGATACTCATCCAGGGACAGAATCAAACATCGATCGTGAGTCTACAGCAGACGGCAGACGGCAATTATATACCCGTTGGCTCCGCTGGCGACGACTCCGATAGCGATAATAAGCCGCAAAAGATTTGCAAGACAGAGCAATCGGTGGCCTCGCCGGCATCCAACTCGTCCACATCAAATAATGCAGCGGGCGTGAGCAGCCAGGCGATTGTGACACAAATTGTAGTAGCGCGCGACggaaaagataaaaatatgacTAGTTTAGGCATGGGCATGAACGGTGGTCTATTGGGCGTGCCCATGGGCTTTCTGGACTTTACACCGGAACCACCAGCACCATCAGCCACACCAGTCACCGTTACGGAACACGTCGATCTATCGTGCAACCCCAGCACCGATACACGCGATCTATCAAATCCCACCGAACCGCTCGACATTGACAATCATTTGGCTCAGCAAATCCATCGGCTCGATCAATCTCCCATGCACTCAATAGCGCATCATCATGCAACCGGCGACGAGAGTAACTCGAATCTGGTGCAGCATATCAAAAGCGAGGTGATTGATGCCAAACACTTGGCTCATGTgcaagcgcagcagcagcaacagcaacaacaacaacagcagcagcagcagcagcaacaacagcagcagcagcagcagcaacaacaacagcagcaacaacatgcacatcatcatcatcagttgCACGCTCAGCAACTGTTGGCCCagagtcagcagcagcagcagcagcaacaacaacagcaacagcagcagcaacaccaacaacaacagcagcagcagcagcaggcggcggTGCATGCCGCGCAGCATGCAGCGCATGCCACGCATGCGGAAATTAGCGGCGCCACTGTCATGGAGATTGATCCGAGCCAGATTAAGAATGAGCCGGGTATGATTATAACGCCAGAGATTGTCAATATGATGTCCACCGGGCATATGGacATGTACAACTCGGATACGAGCGAGGACTCAATGATGATCGCCAACGGTTCGCCGCACGATCAGAATGAGCCGCATTACACAAATTTGGATCAGCAGCACGGCGGACTGGGTCAGTTTAATGGTCCCAAAGCTTGGACACAAGATGATATGAATTCAGCTTTAGATGCATTAAAGAATCAAAACATGAGCCTGACGAAAGCATCTGCCATTTATGGCATACCATCAACGACCTTATGGCAGCGAGCACACCGTTTGGGCATCGAAACGCCTAAGAAGGAGGGCGGCACCAAATCGTGGAACGAGGACGCCCTGCAAAATGCATTGGAGGCATTGCGTTCGGGTCAAATATCGGCGAATAAAGCATCGAAAGCGTTTGGTATTCCCTCATCGACGCTCTACAAGATTGCGCGTCGCGAGGGCATACGGCTGGCGGCGCCATTCAATGCCGCACCAACCACGTGGACACCCGAGGATTTGGAGCGTGCATTGGAGGCGATACGCGCCGGCAATACCTCTGTACAAAAAGCAAGTGCCGAATTCGGCATACCGACAGGAACACTTTATGGACGCTGCAAGCGGGAGGGCATCGAACTATCGCGTTCGAATCCAACGCCCTGGTCCGAGGATGCCATGAACGAGGCATTGAACTCAGTGCgCGGTGGTCAAATGTCCATCAACCAGGCGGCCATACACTACAACCTGCCCTACAGTTCGCTCTACGGACGATTCAAGCGTGGCAAGTACGATGTGGTGGCAAATACCAGTGGCGTCTCGCTGAACAACACCTCGGGCAATACGACCGGCAGCATTGAGATTATCGAGCATAGTCAGGAGAATTCGttgcatatgttgcagcaacagttccCGTACAGTCCGTCGCCACATCCGCCGACGCCACAGCATCATAGTACGCCGCAGCATCACAGTTCGCAGCAGGGGCCGCCGACGCCGCAGCATATGCAACAGCATGTGGtgcacatgcaacagcagtcgCCACACCAGGcacaccatcaacaacaacagcagcagcagcagcacatgcaacaacaacaggatgTGGTCACATCAAGCAGTCAAGTGGTGCatagccagcaacagcaacagcagcttcagcAGATCTATCAGCATCACGGCACGCCCGAGCGCAGTTGA
- Protein Sequence
- MARFEGLLRTAEQLKIKGLCEPAENADDLNEAALATITVSENIQQAVVGNIVNASIVPGAPSPTIEQQQQQQQQQHHQQQQQQHQQEHQQQQQQVQQQQLINSALLTQHTLATNSGIQLANAAGQQLLSNTSGSSSSLQQLQQQQQQQLQPATRKSRVRKRSKTPDLQLGGNNAIVQQPQPAHHQQQQQQQHNQQQQQQQQQQQQQHHHPQTILIQGQNQTSIVSLQQTADGNYIPVGSAGDDSDSDNKPQKICKTEQSVASPASNSSTSNNAAGVSSQAIVTQIVVARDGKDKNMTSLGMGMNGGLLGVPMGFLDFTPEPPAPSATPVTVTEHVDLSCNPSTDTRDLSNPTEPLDIDNHLAQQIHRLDQSPMHSIAHHHATGDESNSNLVQHIKSEVIDAKHLAHVQAQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQHAHHHHQLHAQQLLAQSQQQQQQQQQQQQQQQHQQQQQQQQQAAVHAAQHAAHATHAEISGATVMEIDPSQIKNEPGMIITPEIVNMMSTGHMDMYNSDTSEDSMMIANGSPHDQNEPHYTNLDQQHGGLGQFNGPKAWTQDDMNSALDALKNQNMSLTKASAIYGIPSTTLWQRAHRLGIETPKKEGGTKSWNEDALQNALEALRSGQISANKASKAFGIPSSTLYKIARREGIRLAAPFNAAPTTWTPEDLERALEAIRAGNTSVQKASAEFGIPTGTLYGRCKREGIELSRSNPTPWSEDAMNEALNSVRGGQMSINQAAIHYNLPYSSLYGRFKRGKYDVVANTSGVSLNNTSGNTTGSIEIIEHSQENSLHMLQQQFPYSPSPHPPTPQHHSTPQHHSSQQGPPTPQHMQQHVVHMQQQSPHQAHHQQQQQQQQHMQQQQDVVTSSSQVVHSQQQQQQLQQIYQHHGTPERS
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_00470787;
- 90% Identity
- iTF_00803519;
- 80% Identity
- -