Dmac014711.2
Basic Information
- Insect
- Drosophila macrospina
- Gene Symbol
- -
- Assembly
- GCA_035042075.1
- Location
- JAWNLW010000593.1:1775434-1789686[-]
Transcription Factor Domain
- TF Family
- HTH
- Domain
- HTH_psq domain
- PFAM
- PF05225
- TF Group
- Helix-turn-helix
- Description
- This DNA-binding motif is found in four copies in the pipsqueak protein of Drosophila melanogaster [1]. In pipsqueak this domain binds to GAGA sequence [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 4 6e-09 9.3e-06 25.2 0.0 16 40 659 685 655 688 0.84 2 4 6.8e-14 1e-10 41.0 0.1 2 39 700 737 699 740 0.94 3 4 1.6e-17 2.4e-14 52.7 0.0 1 45 754 799 754 799 0.98 4 4 1.6e-19 2.5e-16 59.0 0.0 1 43 806 849 806 850 0.97
Sequence Information
- Coding Sequence
- ATGCCATGTACAAGCGTCCGCCTCTGCCCCTGCTCCCTGCCCCTGCCGCGCCAGCCGTTGCCCATTTGCCAACTGGGCTGTAActccagctccaactcctaCTCCAACTCCAATTCGAATCCCAAAAACCAAAGTCAAGCGTACACCATAATGACTGGTCTGTTGCGCACCGCGgaacaattgaaaatcaaagGACTCTGTGAGCCGGCTGAGAATGCGGATGATTTGAATGACGCTGCATCGGCGACGATAACCGTGTCGGAGAACATACAACAGGCGGTTGTTGGGAACATTGTGAATGCGAGCCTAGTGCCCGGCGCGCCCTCGCCCACaatcgagcagcagcagcagcaacagcagcagcaccaccaccagcaacaacaacaacaacagcaggagcatcaacagcaggtgcaacagcagcagttggttAACAGTGCATTGCTGGCACAGCATAGTCTTGCAACAAATAGTGGCATACAATTGGCAAATGCGGGTGGACAACAGCTGCTGAGCAACGCAAGTGGCAGCAGTAGTAgcctgcagcagttgcaacagcaacagcaacagcaacaacaacagcagctgcagccaacGCCGCGTAAGTCGCGTTTGCGTAAACGATCGAAATCGCCAGATTTGCaactaggtggcaacgccacagggcaacaaccacagccgGCACatcaccaacagcaacaacaacaacaacaacagcagcaacaacaacagcagcagcagcaacagcagcaacatcatcaacatcatcatccacaAACGATACTCATCCAGGGACAAAATCAAACATCTATCGTGAGTCTACAGCAAACAGCCGACGGCAATTATATACCAGTTACAACTGGTGACGATTCCGATAGCGGTGATAATAAGCCGCAAAAGATTTGCAAGACAGAACAATCGGTGGCCTCGCCGGCATCAAACTCATCGTCCGCATCAAATAATGCCGCTGCAACTGGCGTGAGCGGCCAAGCGATTGTGACACAAATTGTAGTAGCGCGCGACggaaaagataataaaatgaCTAGTTTAGGCATGGGCATGaacgGCGGTCTGTTGGGCGTGCCCATGGGATTTCTGGACTTTACACCGGAACCACCAGCACCATCGGCCACACCAGTCACCGTAACGGAACATGTCGATCTATCGTGCAACCCCAGCACCGATACACGCGATCTATCAAATCCCACCGAACCGCTCGACATTGACAATCATTTGGCTCAGCAAATCCATCGGCTCGATCAATCTCCCATGCACTCAATATCGCATCATCATACGACCGGCGACGAGAGCAACTCGAACCTGGTGCAGCATATCAAAAGCGAAGTGATTGAGGCCAAGCACTTGGCGcatgtgcaacaacagcagcaacagcagcagcagcagcagcagcaacaacaacaacagcagcagcagcaacagcaacaacatgcacatcatcatcagcatttgcatgcacagcaattgttggctcagagtcaacagcagcagcagcagcaacatcaacagcagcagcagcaacaacaacaacagcaacagcagcagcaacaacagcaacaggcagcagtGCATGCACAGCATGCCACGCATGCAACACATGCGGAAATCAGTGGCGCCACTGTCATGGAGATTGATCCAAGCCAAATAAAGCATGAGCCGGGCATGATAATAACGCCAGAGATTGTCAATATGATGTCCACTGGTCATATGGACATGTACAACTCGGATACGAGCGAGGACTCAATGATGATCGCAAACGGTTCGCCGCACGATCAAAATGAGCCGCATTATACGAATTTGGATCAGCAACACGGCGGCCTGGGTGGCAGCGTTTGCGGCCCTGGCGccggtggtgttggtggtggtggcggtggtggtggtggtggaggtgGTAGCGGCGgcattggtggtggtggtggtggtgctaaTGCTGGCGAGAAAGATGCATTAAAGAATCAAAACATGAGCCTGACGAAAGCATCTGCCATTTATGGCATACCATCAACGACATTATGGCAACGTGCTCATCGTTTGGGCATCGAAACGCCTAAGAAGGAGGGCGGCACCAAATCATGGAACGAGGATGCCCTACAGAATGCGTTGGAGGCATTGCGATCGGGTCAAATATCGGCAAATAAAGCATCTAAAGCGTTTGGTATACCCTCATCGACGCTCTACAAGATAGCGCGTCGGGAGGGCATACGACTGGCGGCGCCATTTAATGCCGCACCAACCACGTGGACACCCGAGGATTTGGAGCGTGCATTGGAGGCGATACGTGCCGGTAATACGTCTGTACAAAAAGCAAGTGCTGAATTTGGCATACCCACAGGAACACTTTATGGACGCTGCAAACGGGAGGGCATCGAATTATCGCGTTCGAATCCAACACCTTGGTCCGAGGATGCCATGAACGAGGCATTGAACTCAGTGCGCGTTGGCCAAATGTCCATCAATCAGGCGGCCATACACTACAACCTGCCCTACAGTTCGCTCTATGGGCGCTTCAAGCGCGGCAAATACGATGTTGTGGCAAATACCAGTGGCATCTCGCTGATGAACACATCGGGCAACACGACCGGCAGCATTGAGATTATCGAGCATAGTCAGGAGAATTCGttgcatatgttgcagcaacagttcCCGTATAGTCCGTCGCCGCATCCGCCGACGCCGCAGCATCATAGTACACCGCAGCATCACAGTTCGCAGCAGGGGCCACCGACGCCACAGCATATGCAACAGCATGTGGtgcacatgcaacagcagTCGCCACATCAGGcccatcatcaacaacaacaacagcacttgcaacagcaacaggatgTGGTAACATCGAGCAGCCAAGTGGTGCatagccagcagcaacaacagcaacagcaacaacagcagcagcttcaacagATCTATCAGCATCACGGCACGCCCGAGCGTAGTTGA
- Protein Sequence
- MPCTSVRLCPCSLPLPRQPLPICQLGCNSSSNSYSNSNSNPKNQSQAYTIMTGLLRTAEQLKIKGLCEPAENADDLNDAASATITVSENIQQAVVGNIVNASLVPGAPSPTIEQQQQQQQQHHHQQQQQQQQEHQQQVQQQQLVNSALLAQHSLATNSGIQLANAGGQQLLSNASGSSSSLQQLQQQQQQQQQQQLQPTPRKSRLRKRSKSPDLQLGGNATGQQPQPAHHQQQQQQQQQQQQQQQQQQQQQHHQHHHPQTILIQGQNQTSIVSLQQTADGNYIPVTTGDDSDSGDNKPQKICKTEQSVASPASNSSSASNNAAATGVSGQAIVTQIVVARDGKDNKMTSLGMGMNGGLLGVPMGFLDFTPEPPAPSATPVTVTEHVDLSCNPSTDTRDLSNPTEPLDIDNHLAQQIHRLDQSPMHSISHHHTTGDESNSNLVQHIKSEVIEAKHLAHVQQQQQQQQQQQQQQQQQQQQQQQQHAHHHQHLHAQQLLAQSQQQQQQQHQQQQQQQQQQQQQQQQQQQAAVHAQHATHATHAEISGATVMEIDPSQIKHEPGMIITPEIVNMMSTGHMDMYNSDTSEDSMMIANGSPHDQNEPHYTNLDQQHGGLGGSVCGPGAGGVGGGGGGGGGGGGSGGIGGGGGGANAGEKDALKNQNMSLTKASAIYGIPSTTLWQRAHRLGIETPKKEGGTKSWNEDALQNALEALRSGQISANKASKAFGIPSSTLYKIARREGIRLAAPFNAAPTTWTPEDLERALEAIRAGNTSVQKASAEFGIPTGTLYGRCKREGIELSRSNPTPWSEDAMNEALNSVRVGQMSINQAAIHYNLPYSSLYGRFKRGKYDVVANTSGISLMNTSGNTTGSIEIIEHSQENSLHMLQQQFPYSPSPHPPTPQHHSTPQHHSSQQGPPTPQHMQQHVVHMQQQSPHQAHHQQQQQHLQQQQDVVTSSSQVVHSQQQQQQQQQQQQLQQIYQHHGTPERS
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_00470787;
- 90% Identity
- iTF_00519079;
- 80% Identity
- -