Datr007564.1
Basic Information
- Insect
- Drosophila atroscutellata
- Gene Symbol
- -
- Assembly
- GCA_035041605.1
- Location
- JAWNLA010000095.1:4162095-4167500[+]
Transcription Factor Domain
- TF Family
- HTH
- Domain
- HTH_psq domain
- PFAM
- PF05225
- TF Group
- Helix-turn-helix
- Description
- This DNA-binding motif is found in four copies in the pipsqueak protein of Drosophila melanogaster [1]. In pipsqueak this domain binds to GAGA sequence [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 4 9.2e-12 1.7e-08 33.9 0.0 1 40 577 617 577 620 0.90 2 4 5.1e-14 9.5e-11 41.2 0.1 2 39 632 669 631 672 0.94 3 4 1.2e-17 2.2e-14 52.8 0.0 1 45 686 731 686 731 0.98 4 4 1.2e-19 2.3e-16 59.2 0.0 1 43 738 781 738 782 0.97
Sequence Information
- Coding Sequence
- ATGCAGCTTCAAGGTCTGCTGCGCACCGCGgaacaattgaaaatcaaaggTCTTTGTGAGCCGGCTGAGAATGCGGATGACTTAAATGAAGCGGCTTTGGCGACAATAACCGTATCGGAGAACATACAGCAGGCGGTTGTTGGCAACATTGTGAATGCGAGCATAGTGCCCGGTGCGCCCTCGCCCACGatcgaacagcagcagcaacagcagcagcatcatcaacagcaacagcagcaacatcagcaggagcatcagcagcagcagcaggtgcaacagcagcagcagctgatcaaCAGTGCTTTGCTGACACAGCATACGCTTGCAACAAACAGTGGCATACAATTGGCCAACGCGGCtgggcaacagctgctgagCAACACaagcggcagcagtagcagcctgcaacagttgcagcagcagcagcagcaacagttgcagccaGCGACGCGCAAATCGCGAGTGCGTAAACGTTCGAAAACGCCAGATTTGCAACTGGGTGGCAACAACGCCATCGTTCAACAACCACAGCCGGctcaccatcagcagcagcaacagcagcaacacaaccaacaacaacaacaacagcaacaacagcagcaacagcaacaacaacaacatcatcatccgcAAACGATACTCATCCAGGGACAGAATCAAACATCGATTGTGAGTCTACAGCAGACGGCAGACGGCAATTATATACCCGTTGGCTCCGCTGGCGACGACTCCGATAGCGATAATAAGCCGCAAAAGATTTGCAAGACAGAGCAATCGGTGGCCTCGCCGGCATCCAACTCGTCCACATCGAATAATGCAGCGGGCGTGAGCAGCCAGGCGATTGTGACACAAATTGTAGTAGCGCGCGACggaaaagataaaaatatgaCTAGTTTAGGCATGGGCATGAACGGTGGTCTGTTGGGCGTGCCCATGGGCTTTCTGGACTTTACACCGGAACCACCAGCACCATCAGCCACACCAGTCACCGTTACGGAACACGTCGATCTATCGTGCAACCCCAGCACCGATACACGCGATCTATCAAATCCCACCGAACCGCTCGACATTGACAATCATTTGGCTCAGCAAATCCATCGGCTCGATCAATCTCCCATGCACTCAATAGCGCATCATCATGCAACCGGCGACGAGAGTAACTCGAATCTGGTGCAACATATCAAAAGCGAGGTGATTGAGGCCAAACACTTGGCCCATGTgcaagcgcagcagcagcagcaacagcagcaacaacaacaacagcagcagcaacaacaacagcagcagcagcaacaacaacaacagcagcaacaacatgcacatcatcatcatcagttgCACGCTCAGCAACTGTTGGCCCagagtcagcagcagcagcagcagcaacaacaacagcaacagcagcagcaacaccaacaacaacagcagcagcagcaggcggcggtGCATGCCGCGCAGCATCCAGCGCATGCCACGCATGCGGAAATTAGCGGCGCCACTGTCATGGAGATTGATCCGAGCCAGATTAAGAATGAGCCGGGTATGATTATAACGCCAGAGATTGTCAATATGATGTCCACCGGGCATATGGacATGTACAACTCGGATACGAGCGAGGACTCAATGATGATCGCCAACGGTTCGCCGCACGATCAGAATGAGCCGCATTACACGAATTTGGATCAGCAGCACGGCGGACTGGGTCAGTTTAATGGTCCCAAAGCTTGGACACAAGATGATATGAATTCAGCTTTAGATGCATTAAAGAATCAAAACATGAGCCTGACGAAAGCATCTGCCATTTATGGCATACCATCAACGACCTTATGGCAGCGAGCACACCGTTTGGGCATCGAAACGCCTAAGAAGGAGGGCGGTACCAAATCGTGGAACGAGGACGCCCTGCAAAATGCATTGGAGGCATTGCGTTCGGGTCAAATATCGGCGAATAAAGCATCGAAAGCGTTTGGTATTCCCTCATCGACGCTCTACAAGATTGCGCGTCGCGAGGGCATACGGCTGGCGGCGCCATTCAATGCCGCACCAACCACGTGGACACCCGAGGATTTGGAGCGTGCATTGGAGGCGATACGCGCCGGCAATACCTCTGTACAAAAAGCAAGTGCCGAATTCGGCATACCGACAGGAACACTTTATGGACGCTGCAAGCGGGAGGGCATCGAACTATCGCGTTCGAATCCAACGCCCTGGTCCGAGGATGCCATGAACGAGGCATTGAACTCAGTGCGCGTTGGTCAAATGTCCATCAACCAGGCGGCCATACACTACAACCTGCCCTACAGTTCGCTCTACGGACGATTCAAGCGTGGCAAGTACGATGTGGTGGCAAATACCAGTGGCGTCTCGTTGATCAACACCTCGGGCAATACGACCGGCAGCATTGAGATTATCGAGCATAGTCAGGAGAATTCGttgcatatgttgcagcaacagttccCGTACAGTCCGTCGCCACATCCGCCGCCACAGCATCATAGTACGCCGCAGCATCACAGTTCGCAGCAGGGGCCGCCGACGCCGCAGCATATGCAACAGCATGTGGtgcacatgcaacagcagtcgCCACACCAGGcccaccatcaacaacaacagcagcagcagcagcacatgcaacaacaacaggatgTAGTCACATCAAGCAGTCAAGTGGTGCatagccagcaacagcaacaacagcttcaGCAGATCTATCAGCATCACGGCACGCCCGAGCGCAGTTGA
- Protein Sequence
- MQLQGLLRTAEQLKIKGLCEPAENADDLNEAALATITVSENIQQAVVGNIVNASIVPGAPSPTIEQQQQQQQHHQQQQQQHQQEHQQQQQVQQQQQLINSALLTQHTLATNSGIQLANAAGQQLLSNTSGSSSSLQQLQQQQQQQLQPATRKSRVRKRSKTPDLQLGGNNAIVQQPQPAHHQQQQQQQHNQQQQQQQQQQQQQQQQHHHPQTILIQGQNQTSIVSLQQTADGNYIPVGSAGDDSDSDNKPQKICKTEQSVASPASNSSTSNNAAGVSSQAIVTQIVVARDGKDKNMTSLGMGMNGGLLGVPMGFLDFTPEPPAPSATPVTVTEHVDLSCNPSTDTRDLSNPTEPLDIDNHLAQQIHRLDQSPMHSIAHHHATGDESNSNLVQHIKSEVIEAKHLAHVQAQQQQQQQQQQQQQQQQQQQQQQQQQQQQQHAHHHHQLHAQQLLAQSQQQQQQQQQQQQQQQHQQQQQQQQAAVHAAQHPAHATHAEISGATVMEIDPSQIKNEPGMIITPEIVNMMSTGHMDMYNSDTSEDSMMIANGSPHDQNEPHYTNLDQQHGGLGQFNGPKAWTQDDMNSALDALKNQNMSLTKASAIYGIPSTTLWQRAHRLGIETPKKEGGTKSWNEDALQNALEALRSGQISANKASKAFGIPSSTLYKIARREGIRLAAPFNAAPTTWTPEDLERALEAIRAGNTSVQKASAEFGIPTGTLYGRCKREGIELSRSNPTPWSEDAMNEALNSVRVGQMSINQAAIHYNLPYSSLYGRFKRGKYDVVANTSGVSLINTSGNTTGSIEIIEHSQENSLHMLQQQFPYSPSPHPPPQHHSTPQHHSSQQGPPTPQHMQQHVVHMQQQSPHQAHHQQQQQQQQHMQQQQDVVTSSSQVVHSQQQQQQLQQIYQHHGTPERS
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_00470787;
- 90% Identity
- iTF_00803519;
- 80% Identity
- -