Basic Information

Insect: Drosophila albomicans
Gene Symbol: br
Assembly: GCA_009650485.1
Location: NC:29177827-29241742[-]

Transcription Factor Domain

TF Family: HTH
Domain: HTH_psq domain
PFAM: PF05225
TF Group: Helix-turn-helix
Description: This DNA-binding motif is found in four copies in the pipsqueak protein of Drosophila melanogaster [1]. In pipsqueak this domain binds to GAGA sequence [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 4 2.5e-11 4.1e-08 32.4 0.0 1 40 702 742 702 745 0.90

2 4 5.3e-14 8.7e-11 40.9 0.1 2 39 757 794 756 797 0.94

3 4 1.2e-17 2e-14 52.6 0.0 1 45 811 856 811 856 0.98

4 4 1.3e-19 2.1e-16 58.9 0.0 1 43 863 906 863 907 0.97

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	4	2.5e-11	4.1e-08	32.4	0.0	1	40	702	742	702	745	0.90
2	4	5.3e-14	8.7e-11	40.9	0.1	2	39	757	794	756	797	0.94
3	4	1.2e-17	2e-14	52.6	0.0	1	45	811	856	811	856	0.98
4	4	1.3e-19	2.1e-16	58.9	0.0	1	43	863	906	863	907	0.97

Sequence Information

Coding Sequence: ATGGCTGCCGTGCGGGGTCATCAGTACTTTAGTCTGCGCTGGAATAACTATCAGAACACGATGACGTCAGTGTTTCAGCAGCTGCGCGAGGATCTCTCCTTCGTTGATGTGACCTTGTCCTGTGAGCATGGCTCACTCAAGGCGCACAAGGTTGTGCTCTCCGCATGCTcgacatattttcaaaaacttttgctcGAGAATCCGTGCAAACATCCAACGATCATTTTACCCGCCGACATCATATTCACAGATCTTAAAACAATTATCGATTTTGTTTATCGCGGCGAAATCGATGTCACCGAATCGGACTTACAGGGTCTGCTACGCACAGCGgaacaattgaaaatcaaagGACTCTGTGAGCCGGCTGAGAATGCGGATGATTTGAATGACGCTGCATCGGCGACGATAACCGTGTCGGAGAACATACAACAGACGGTTGTTGGGAACATTGTGAATGCGAGCCTTGTGCCCGGCGCGCCCTCGCCCACaatcgagcagcagcaacagcatcaccagcagcagcaacaggcacagcagcaacaacagcagcagcaacagcaacaggagcatcaacagcaggtgcaacagcagcagctggtgaACAGTGCATTGCTTTCACAGCATAGTCTTGCAACAAACAGTGGCATACAGTTGGCCAGTGGGGCTGGGCAACAGCTGTTGAGTGGCAATTcgagtggcagcagcagcagtctgcaacagttgcagcaacagcagcaacaacaacaacagttgcagccaACGCCGCGAAAGTCGCGATTGCGTAAACGCTCGAAATCGCCAGATTTGCAACTAGGTGGCAGCGCTGCAGGGCAACAACCACAGCCAGCGcatcaccagcaacaacagcaacaacaacagcaacaacaacagcaacagcagcaacaacagcatcatcaacaacatcatccACAAACGATACTCATACACGGACAGAATCAAACATCGATCGTGAGTCTGCAGCAAACAGCCGACGGCAATTATATACCAGTTACGGCTGGCGACGATTCCGATAGCGATAATAAGCCGCAAAAGATCTGCAAGACAGAGCAATCGGTGGCCTCGCCGGCATCCAACTCGTCCACATCGAATAATGCCGCATCTGGCGTGAGCGGCCAAGCGATTGTGACACAAATTGTAGTAGCGCGCGACGgaaaagataataaaatgaCTAGTTTAGGCATGGGCATGAACGGCGGTCTGTTAAGCGTGCCCATGGGATTTCTGGACTTTACACCGGAACCACCAGCACCATCGGCCACACCAGTCACCGTTACGGAACACGTCGATCTATCGTGCAACCCCAGCACCGATACACGCGATCTATCAAATCCCACCGAACCGCTCGACATAGACAATCATTTGGCTCAGCAAATCCATCGGCTCGATCAATCTCCCATGCACTCGATAGCGCATCATCATACGACCGGCGACGAGAGCAACTCGAATCTGGTGCAGCATATCAAAAGCGAAGTGATTGAGGCCAAGCACCTGGCGCATGTGCaagcccaacagcagcagcaacaacagcagcaacaacaacagcagcaacaacagcagcagcaacaacaacaacagcagcagcaacatcagcaacatgcacatcatcatcagcatttgCACGCTCAGCAATTGTTGGCGCAaagtcagcaacagcagcagcagcaacaacagcagcaacaacagcagcaacatcaacagcaacaacagcaagcagcgGTGCATGCACAACATGCCACGCATGCTGCACATGCGGAAATCAGTGGTGCCACTGTCATGGAGATTGATCCGAGCCAGATCAAGCATGAGCCGGGCATGATAATAACGCCAGAGATTGTCAATATGATGTCCACTGGGCATATGGACATGTACAACTCGGATACGAGCGAGGACTCAATGATGATCGCCAACGGTTCGCCGCACGATCAGAATGAGCCGCATTATACGAATTTGGATCAGCAGCACGGCGGCCTGGGTGGCAGCGTTTGCGGCCCCGGCGCCGGtggtgttggtggtggtggcggcaTTGGTGGTGGTGGTAGTGCTGGCGAGAAAGGTCAGTTTAATGGTCCCAAAGCTTGGACACAAGATGATATGAATTGCGCTTTAGATGCATTAAAGAATCAAAACATGAGCCTGACGAAAGCATCTGCCATTTATGGCATACCATCAACGACATTATGGCAACGTGCTCATCGTTTGGGCATCGAAACGCCTAAGAAGGAGGGCGGAACCAAATCGTGGAACGAGGATGCATTGCAGAATGCGCTGGAGGCGCTCCGATCGGGTCAGATATCGGCGAATAAGGCATCGAAAGCGTTTGGTATTCCCTCATCGACGCTCTACAAGATAGCGCGTCGGGAGGGCATACGGCTGGCGGCGCCATTCAATGCCGCACCAACCACGTGGACACCCGAGGATTTGGAGCGTGCATTGGAGGCGATACGCGCCGGCAATACGTCCGTGCAAAAAGCCAGCGCCGAATTCGGCATACCCACAGGAACACTTTATGGACGCTGCAAGCGGGAGGGCATCGAACTATCGCGTTCGAATCCAACACCTTGGTCCGAGGATGCCATGAACGAGGCATTGAACTCAGTGCGCGTCGGCCAAATGTCCATCAATCAGGCGGCCATACATTATAACCTGCCCTACAGCTCGCTCTATGGGCGCTTCAAGCGCGGCAAATATGATGTCGTGGCCAATACCAGTGGCGTATCGCTGATGAACACATCGGGCAACACGACTGGCAGCATTGAGATTATTGAGCATAGTCAGGAGAATTCGttGCAtatgttgcagcaacagttcCCGTACAGTCCGTCGCCGCATCCGCCGACGCCGCAGCATCATAGCACACCGCAACATCATAGCACACCGCAGCACCACAGTTCGCAGCAGGGGCCGCCGACGCCTCAGCATATGCAACAGCATGTGGTGCACATGCAACAGCAGTCGCCGCATCAGGCGcaccatcaacagcaacacatgcaacagcagcagcaacaggacgTGGTAACATCGAGCAGCCAAGTGGTGCAtagtcagcaacaacaacagcagcagcagcaacagcttcagcAGATCTATCAGCATCACGGCACGCCCGAGCGTAGTTGA
Protein Sequence: MAAVRGHQYFSLRWNNYQNTMTSVFQQLREDLSFVDVTLSCEHGSLKAHKVVLSACSTYFQKLLLENPCKHPTIILPADIIFTDLKTIIDFVYRGEIDVTESDLQGLLRTAEQLKIKGLCEPAENADDLNDAASATITVSENIQQTVVGNIVNASLVPGAPSPTIEQQQQHHQQQQQAQQQQQQQQQQQEHQQQVQQQQLVNSALLSQHSLATNSGIQLASGAGQQLLSGNSSGSSSSLQQLQQQQQQQQQLQPTPRKSRLRKRSKSPDLQLGGSAAGQQPQPAHHQQQQQQQQQQQQQQQQQQHHQQHHPQTILIHGQNQTSIVSLQQTADGNYIPVTAGDDSDSDNKPQKICKTEQSVASPASNSSTSNNAASGVSGQAIVTQIVVARDGKDNKMTSLGMGMNGGLLSVPMGFLDFTPEPPAPSATPVTVTEHVDLSCNPSTDTRDLSNPTEPLDIDNHLAQQIHRLDQSPMHSIAHHHTTGDESNSNLVQHIKSEVIEAKHLAHVQAQQQQQQQQQQQQQQQQQQQQQQQQQQHQQHAHHHQHLHAQQLLAQSQQQQQQQQQQQQQQQHQQQQQQAAVHAQHATHAAHAEISGATVMEIDPSQIKHEPGMIITPEIVNMMSTGHMDMYNSDTSEDSMMIANGSPHDQNEPHYTNLDQQHGGLGGSVCGPGAGGVGGGGGIGGGGSAGEKGQFNGPKAWTQDDMNCALDALKNQNMSLTKASAIYGIPSTTLWQRAHRLGIETPKKEGGTKSWNEDALQNALEALRSGQISANKASKAFGIPSSTLYKIARREGIRLAAPFNAAPTTWTPEDLERALEAIRAGNTSVQKASAEFGIPTGTLYGRCKREGIELSRSNPTPWSEDAMNEALNSVRVGQMSINQAAIHYNLPYSSLYGRFKRGKYDVVANTSGVSLMNTSGNTTGSIEIIEHSQENSLHMLQQQFPYSPSPHPPTPQHHSTPQHHSTPQHHSSQQGPPTPQHMQQHVVHMQQQSPHQAHHQQQHMQQQQQQDVVTSSSQVVHSQQQQQQQQQQLQQIYQHHGTPERS

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: iTF_00470787;
90% Identity: iTF_00519079;
80% Identity: iTF_00472441;