Dtri010127.2
Basic Information
- Insect
- Drosophila tripunctata
- Gene Symbol
- -
- Assembly
- GCA_035047385.1
- Location
- JAWNPS010000236.1:1436214-1446258[+]
Transcription Factor Domain
- TF Family
- HTH
- Domain
- HTH_psq domain
- PFAM
- PF05225
- TF Group
- Helix-turn-helix
- Description
- This DNA-binding motif is found in four copies in the pipsqueak protein of Drosophila melanogaster [1]. In pipsqueak this domain binds to GAGA sequence [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 4 1.2e-11 2e-08 33.8 0.0 1 40 622 662 622 665 0.90 2 4 6.7e-14 1.1e-10 41.1 0.1 2 39 677 714 676 717 0.94 3 4 1.6e-17 2.6e-14 52.7 0.0 1 45 731 776 731 776 0.98 4 4 1.6e-19 2.7e-16 59.1 0.0 1 43 783 826 783 827 0.97
Sequence Information
- Coding Sequence
- ATGGGTTGGGGTTGGGATTGGgGTCTGTTACGCACCGCGGagcaattgaaaatcaaagGACTTTGTGAGCCGGCTGAGAATGCGGATGATTTGAATGACGCTGCATCGGCGACGATAACCGTATCGGAGAACATACAACAGGCGGTTGTTGGCAACATTGTGAATGCGAATTTAGTGCCCGGTGCGCCCTCGCCCACAatcgaacagcagcagcatcatcagcaacagcaacaacaacaggcacagcagcagcaacaacaagcacagcagcagcagcagcagcagcagcaggagcatcaacagcaggtgcaacaacagcagctggttAATAGCGCATTGCTGGCACAGCATAGTCTTGCCACAAAcagtggtggtgctggtggcatACAATTGGCAAATGCGGCTGgtggacaacagcaacagctgctgagCAATACAAGTGGcggtagcaacagcaataacagcagtctacaacagttgcagcagcagcaacaacagcaacagttgcagccaACGCCGCGTAAATCGCGTTTGCGTAAACGTTCAAAATCTCCTGATTTGCAACTAGGTGGCAACGCCACACCACAGCCAGCAcatcaccagcaacagcaacaacaacagcagcaacaacaacaacaacatcaatcaCATCATCATCCACAAACGATACTCATTCAGGGACAAAATCAAACATCTATTGTGAGTCtacagcaaacagcagacGGCAATTATATACCGGTTGCAACATCAGCTGGCGACGATTCGGATAGCGATAATAAACCGCAAAAGATTTGCAAAACTGAACAATCGGTAGCATCACCGGCATCCAATTCATCTACATCGAATAATGCCGCATCTGGTGGCGTGAACAGCGGACAAGCGATTGTGACACAAATTGTAGTAGCGCGCGACGGAAAAGATAATAAAATGACTAGTTTAGGCATGGGCATGAACGGCGGTCTGTTGGGCGTGCCCATGGGTTTTCTGGACTTTACACCGGAACCACCAGCACCATCGGCCACACCAGTCACCGTAACGGAACACGTCGATCTATCGTGCAACCCCAGCACCGATACACGCGATCTATCAAATCCCACCGAACCGCTCGACATTGACAATCATTTGGCTCAACAAATCCATCGGCTCGATCAATCTCCCATGCATTCGATAGCGCATCATCACACGACCGGAGACGAGAGCAACTCGAATCTGGTGCAGCATATCAAAAGTGAAGTGATTGAGGCCAAACACTTGGCGCatgtgcaacaacagcagcagcaacaacaacaacagcagcaacaacaacagcagcagcaacaacaacagcagcagcagcaacagcagcagcaacagcagcagcaacaacaacagcagcagcaacatgcacatcatcatcagcatttgCACGCTCAGCAACTGTTGGCGCAGAgtcagcaacatcagcaacaacaacagcagcaacaacagcagcaacaacaacagcaacaggctgCGGTGCATGCACAGCATGCCACGCATGCCACACATGGTGAAATTGGTGGCGCCACTGTCATGGAGATTGATCCGAGCCAGATCAAGCATGAGCCAGGCATGATAATAACGCCAGAGATTGTCAATATGATGTCCACTGGGCATATGGACATGTACAACTCGGATACGAGCGAGGACTCAATGATGATCGCCAACGGTTCGCCGCACGATCAAAATGAGCCGCATTATACGAATTTGGATCAGCAACACGGCGGCTTGGGTGGCAGCGTTTGCGGCCCCGGCGccggtggtgttggtggtggtggtggcggtggcattggtggtggtggtaatGCTGGCGAGAAAGGTCAGTTTAATGGTCCCAAAGCTTGGACACAAGATGATATGAATTCAGCTTTAGATGCATTAAAGAATCAAAACATGAGCCTGACGAAAGCATCTGCCATTTATGGCATACCATCAACGACCTTGTGGCAACGTGCACATCGTTTGGGCATCGAAACGCCTAAGAAGGAGGGCGGTACGAAATCATGGAACGAGGATGCATTACAGAATGCCCTGGAAGCGTTGCGATCGGGTCAAATATCGGCAAATAAAGCATCGAAAGCGTTCGGTATACCCTCATCGACGCTCTACAAGATAGCGCGTCGTGAGGGCATACGTCTGGCGGCGCCATTCAATGCCGCACCAACCACGTGGACACCCGAGGATTTGGAGCGTGCATTGGAGGCGATACGAGCCGGTAATACGTCGGTGCAAAAAGCTAGCGCTGAATTTGGTATACCAACAGgaacacTTTATGGACGCTGCAAACGGGAGGGCATCGAATTATCGCGTTCAAATCCAACACCTTGGTCCGAGGATGCCATGAACGAGGCATTGAACTCAGTGCGCGTTGGTCAAATGTCCATCAATCAGGCGGCCATACACTATAACCTGCCCTACAGTTCGCTCTATGGACGCTTTAAGCGCGGCAAATACGATGTTGTGGCAAATACCAGTGGCGTCTCGCTGATGAACACATCGGGCAACACAACCGGCAGCATTGAGATTATCGAACATAGTCAGGAGAATTCGTTGCAtatgttgcagcaacaattcCCGTACAGTCCGTCGCCACATCCGCCGACGCCGCAGCATCATAGTACACCGCAGCATCACAGCTCACAGCAGGGGCCACCGACGCCACAGCATATGCAACAGCATGTGGTGcacatgcaacagcagcagtcgccACATCAGgcgcatcatcagcagcacttgcaacagcagcaacaggatgTGGTAACATCAAGTAGCCAAGTGGTgcacagccaacaacaacaacagcagcaacagcaacaacaacaacaacagcagcaacaacagcagcagcagcttcagcaGATTTATCAGCATCATGGCACGCCGGAGCGTAGTTGA
- Protein Sequence
- MGWGWDWGLLRTAEQLKIKGLCEPAENADDLNDAASATITVSENIQQAVVGNIVNANLVPGAPSPTIEQQQHHQQQQQQQAQQQQQQAQQQQQQQQQEHQQQVQQQQLVNSALLAQHSLATNSGGAGGIQLANAAGGQQQQLLSNTSGGSNSNNSSLQQLQQQQQQQQLQPTPRKSRLRKRSKSPDLQLGGNATPQPAHHQQQQQQQQQQQQQHQSHHHPQTILIQGQNQTSIVSLQQTADGNYIPVATSAGDDSDSDNKPQKICKTEQSVASPASNSSTSNNAASGGVNSGQAIVTQIVVARDGKDNKMTSLGMGMNGGLLGVPMGFLDFTPEPPAPSATPVTVTEHVDLSCNPSTDTRDLSNPTEPLDIDNHLAQQIHRLDQSPMHSIAHHHTTGDESNSNLVQHIKSEVIEAKHLAHVQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQHAHHHQHLHAQQLLAQSQQHQQQQQQQQQQQQQQQQAAVHAQHATHATHGEIGGATVMEIDPSQIKHEPGMIITPEIVNMMSTGHMDMYNSDTSEDSMMIANGSPHDQNEPHYTNLDQQHGGLGGSVCGPGAGGVGGGGGGGIGGGGNAGEKGQFNGPKAWTQDDMNSALDALKNQNMSLTKASAIYGIPSTTLWQRAHRLGIETPKKEGGTKSWNEDALQNALEALRSGQISANKASKAFGIPSSTLYKIARREGIRLAAPFNAAPTTWTPEDLERALEAIRAGNTSVQKASAEFGIPTGTLYGRCKREGIELSRSNPTPWSEDAMNEALNSVRVGQMSINQAAIHYNLPYSSLYGRFKRGKYDVVANTSGVSLMNTSGNTTGSIEIIEHSQENSLHMLQQQFPYSPSPHPPTPQHHSTPQHHSSQQGPPTPQHMQQHVVHMQQQQSPHQAHHQQHLQQQQQDVVTSSSQVVHSQQQQQQQQQQQQQQQQQQQQQLQQIYQHHGTPERS
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_00470787;
- 90% Identity
- iTF_00519079;
- 80% Identity
- -