Dmac009183.2
Basic Information
- Insect
- Drosophila maculinotata
- Gene Symbol
- -
- Assembly
- GCA_035045305.1
- Location
- JAWNPD010000387.1:16507058-16513466[+]
Transcription Factor Domain
- TF Family
- HTH
- Domain
- HTH_psq domain
- PFAM
- PF05225
- TF Group
- Helix-turn-helix
- Description
- This DNA-binding motif is found in four copies in the pipsqueak protein of Drosophila melanogaster [1]. In pipsqueak this domain binds to GAGA sequence [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 4 1.1e-11 2.1e-08 33.8 0.0 1 40 632 672 632 675 0.90 2 4 6.1e-14 1.2e-10 41.0 0.1 2 39 687 724 686 727 0.94 3 4 1.4e-17 2.7e-14 52.7 0.0 1 45 741 786 741 786 0.98 4 4 1.7e-19 3.1e-16 58.8 0.0 1 43 793 836 793 837 0.97
Sequence Information
- Coding Sequence
- ATGAGccgcagaagcagcagcagcagcagcagcagcaatgaccGCAGCAGTCGAGGCAAGCGCGTTCCTCCCGAAAACCCTTCCAAGCAATCATGCATCCTTTACTCGTTTCCCCTGTCCATGCCCCGCATCCCGCGCACTTCTCAGCACACCACGCCGTCGCGCGCTTCCTTGCCCCGTAGTTCCGGTCTGCTACGCACCGCGGaacaattgaaaatcaaaGGCCTCTGTGAGCCGGCGGAGAATGCGGATGATTTAAATGACGCGGCATCGGCGACAATAACCGTATCGGAGAATATACAGCAGTCGGTTGTTGGCAACATTGTGAATGCGAGCCTAGTGCCCGGCGCGCCCTCGCCCTCGatcgaacagcagcagcagcatcatcagcagcagcagcagcaacagcaacaacagcagcaacaacaacaacagcagcaacatcagcaggagcatcagcagcaggtgcagcagcaacagcaattggtTAATAGTGCGCTGCTGGCACAGCATACGCTTGCAACAAACAGTGGCATACAATTGGCCAACGCTGCGGGGCAACAGCTGCTGAGCAACAcaagcgccagcagcagcagcagcagtctgcaacagctgcagcagcaacagcaacagcagcaacaacaacagttgcagccaACGCCGCGAAAATCGCGATTGCGAAAACGCTCCAAATCGCCGGATTTGCAGCTGGTGGGCAACGCCACCACCGTCGCCGCCGGTCAACAGCCACAGCCGGcacatcatcagcaacagcagcaacaacaacaacagcaacaaacacaacaacaacaacaacaacatcatcatcatccgcaAACGATACTCATCCAGGGACAAAATCAAACATCTATCGTTAGTCTACAGCAAACCGCCGACGGCAACTATATACCCGTTAGTTCGGCGGGCGACGACAGCGATAGCGATAATAAGCCGCAAAAGATCTGCAAGACAGAGCAATCGGTGGCCTCGCCGGCATCCAACTCGTCCACATCGAATAATGCAGCGGGCGTGAGCGGCCAGGCGATTGTGACACAAATTGTAGTAGCGCGCGACGGAAAAGATAAAAATATGACTAGTTTAGGCATGGGCATGAACGGCGGTCTGTTGGGCGTGCCCATGGGCTTTCTGGACTTTACACCGGAACCACCAGCACCATCGGCCACACCAGTCACCGTTACGGAACATGTCGATCTATCGTGCAATCCCAGCACCGATACACGCGATCTATCAAATCCCACCGAACCGCTCGACATTGACAATCATTTGGCTCAGCAAATCCATCGGCTCGATCAATCTTCCATGCACTCAATATCGCATCATCATGCAACCGGCGACGAGAGCAACTCGAATCTGGTGCAGCATATCAAAAGCGAGGTGATTGAGGCCAAGCACTTGGCGcatgtgcaacagcagcaacagcaacaacagcaacagcagcaacagcagcagcaacaacaacagcagcagcagcaacagcagcaacatgcacatcatcatcatcagttgCACGCTCATCAAATGTTGGCACAgagtcagcaacagcagcagcagcagcaacaccaacaacagcaacagcaggcggCAGTGCATGCCGCACAGCATGCGGCACAACATGCAACGCATGCGGAAATTAGCGGTGCCACTGTCATGGAGATTGATCCGAGCCAGATCAAGAATGAGCCGGGCATGATTATAACGCCAGAGATTGTCAATATGATGCCCACCGGGCATATGGACATGTACAACTCGGATACGAGCGAGGACTCAATGATGATCGCCAACGGTTCGCCGCACGATCAGAATGAGCCGCATTATACGAATTTGGATCAGCAGCACGGCGGCCTGGGTCAGTTTAATGGTCCCAAAGCTTGGACACAAGATGATATGAATTCAGCTTTAGATGCATTAAAGAATCAAAACATGAGCCTGACGAAAGCATCTGCCATTTATGGCATACCATCAACGACCTTGTGGCAGCGTGCACACCGTTTGGGCATCGAAACGCCTAAGAAGGAGGGCGGCACCAAATCCTGGAACGAGGATGCATTACAGAATGCCTTGGAGGCATTGCGATCGGGTCAAATATCGGCGAATAAAGCATCGAAAGCGTTTGGTATACCCTCATCGACGCTCTATAAGATTGCGCGTAGGGAGGGCATACGGCTGGCGGCGCCATTCAATGCCGCACCAACCACGTGGACACCCGAGGATCTGGAGCGTGCATTGGAGGCGATACGCGCCGGCAATACGTCTGTACAAAAAGCAAGTGCCGAATTCGGCATACCGACAGGAACACTTTATGGACGCTGCAAGCGGGAGGGCATCGAACTATCGCGTTCGAATCCAACACCTTGGTCCGAGGATGCAATGACCGAGGCATTGAACTCAGTGCGTGTTGGTCAAATGTCCATCAATCAGGCGGCCATACACTATAACCTGCCCTACAGCTCGCTCTATGGACGCTTTAAGCGCGGCAAATACGATGTGGTGGCAAATACCAGTGGCGTCTCCCTAAACAACACCTCGGGCAATACGACCGGCAGCATTGAGATTATCGAGCATAGTCAGGAAAATTCGttgcatatgttgcagcaacagttcCCGTACAGTCCGTCGCCGCATCCGCCGACGCCGCAGCATCATAGTACGCCGCAGCATCATAGCACGCCGCAGCATCACAGTTCGCAGGGTCCGCCGACGCCGCAGCATATGCAACAGCATGTGGTGCACATGCAACAGTCGCCCCACCAGGCGcaccatcaacaacagcaacagcacatgCAACAGGATGTGGTCACATCGAGCAGCCAGGTGGTGCatagccagcaacagcaacaacaacaacagcagcagcagcaacaacaacagcaacagcagcagcaacagcttcaGCAGATTTATCAGCATCACGGAACGCCCGAGCGTAGTTGA
- Protein Sequence
- MSRRSSSSSSSSNDRSSRGKRVPPENPSKQSCILYSFPLSMPRIPRTSQHTTPSRASLPRSSGLLRTAEQLKIKGLCEPAENADDLNDAASATITVSENIQQSVVGNIVNASLVPGAPSPSIEQQQQHHQQQQQQQQQQQQQQQQQQHQQEHQQQVQQQQQLVNSALLAQHTLATNSGIQLANAAGQQLLSNTSASSSSSSLQQLQQQQQQQQQQQLQPTPRKSRLRKRSKSPDLQLVGNATTVAAGQQPQPAHHQQQQQQQQQQQTQQQQQQHHHHPQTILIQGQNQTSIVSLQQTADGNYIPVSSAGDDSDSDNKPQKICKTEQSVASPASNSSTSNNAAGVSGQAIVTQIVVARDGKDKNMTSLGMGMNGGLLGVPMGFLDFTPEPPAPSATPVTVTEHVDLSCNPSTDTRDLSNPTEPLDIDNHLAQQIHRLDQSSMHSISHHHATGDESNSNLVQHIKSEVIEAKHLAHVQQQQQQQQQQQQQQQQQQQQQQQQQQHAHHHHQLHAHQMLAQSQQQQQQQQHQQQQQQAAVHAAQHAAQHATHAEISGATVMEIDPSQIKNEPGMIITPEIVNMMPTGHMDMYNSDTSEDSMMIANGSPHDQNEPHYTNLDQQHGGLGQFNGPKAWTQDDMNSALDALKNQNMSLTKASAIYGIPSTTLWQRAHRLGIETPKKEGGTKSWNEDALQNALEALRSGQISANKASKAFGIPSSTLYKIARREGIRLAAPFNAAPTTWTPEDLERALEAIRAGNTSVQKASAEFGIPTGTLYGRCKREGIELSRSNPTPWSEDAMTEALNSVRVGQMSINQAAIHYNLPYSSLYGRFKRGKYDVVANTSGVSLNNTSGNTTGSIEIIEHSQENSLHMLQQQFPYSPSPHPPTPQHHSTPQHHSTPQHHSSQGPPTPQHMQQHVVHMQQSPHQAHHQQQQQHMQQDVVTSSSQVVHSQQQQQQQQQQQQQQQQQQQQQLQQIYQHHGTPERS
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_00470787;
- 90% Identity
- iTF_00495777; iTF_00598069; iTF_00508246; iTF_00567455;
- 80% Identity
- -