Ecor017996.2
Basic Information
- Insect
- Electrophaes corylata
- Gene Symbol
- retn
- Assembly
- GCA_947095575.1
- Location
- OX352717.1:3922582-3936192[-]
Transcription Factor Domain
- TF Family
- ARID
- Domain
- ARID domain
- PFAM
- PF01388
- TF Group
- Helix-turn-helix
- Description
- This domain is know as ARID for AT-Rich Interaction Domain [2], and also known as the BRIGHT domain [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 2 5.3e-20 1.2e-16 61.0 0.0 16 89 30 101 22 101 0.93 2 2 4.6 1e+04 -2.9 0.0 25 37 235 247 195 249 0.59
Sequence Information
- Coding Sequence
- ATGAGAAGCCGGCGTCGCTCCATCGCGGTTTCTGATTGGCTGGCTGCGGGGTTGAGGGGATCAAGGGCCTTGATACAGCTCTCGATAAGCGGAACCCCGATAAATCGGCTGCCGATAATGGCCAAGTCTGTGCTGGACCTCTACGAGCTGTACAATCTGGTTATTGCGCGTGGTGGCCTGGTCGAGGTGATCAACAAAAAGTTGTGGCAGGAGATTATCAAGGGACTCCGGCTACCGTCTTCCATCACGTCTGCGGCCTTCACCTTACGCACCCAATACATGAAATATCTTTACGACTATGAGTGTGAGAAAAAGAACCTGTCTACCAGAAGCGAGTTGGACGCTGCCATCGAAGGCAACAAGCGGGAAGGAAGACGTGCTTCGGGCCAGTACGATGCCCAAGCAGCATTAGGAATGCCACCTCTCAACCGCGGGGTCCCCGCGTCTCTTGCCCAGCTTTCCCAGCATATGCAGCCTCTGTCTCTCTCTCTAGGAGGAGGGGTAGCGGGGGTTCCCCGTCTACCTCCCTTACCCCCTCATGCGCCGCACATATCCCAGCACGACATCGAATACAGAGTGAGAGAGTATATGAAGATGATACAGACACAACGAGAGCTAATGAGAAATGGTTCAGAATCCCCGCCCAGTGTCAACAACGGCCCTGCGTCAATGATGTCTCCGCGCGACGCCGCCGCTCTAAGCGCCATCGACGTGTCGCGCCTAACGCTGTGGTCGCTCTACAACAATAACAACAACAACAGTCCCGCGCCGGACCTGGAGCCACAACGTGAGGCACTCAACCTCAGTGAGAGTCCGAACTCCAGCACAAGTGGCGGAAAGCGCGAAGCTTGTCGTTCCCCCCCTCCACCAGCTAAGCGCCGCACCCCCCGACCTCCATCTCCACGGCTACCTTCTCCCCCAAGACAAGCCTGCGCGCCTGCACCGGCCCAGCTGAATGGAGGAACCACTAATGGAACAAATGGAGCAGCCTTTAAAATTACCACCAGAGGTGATGCTAATACAGGAGATCAGCAACTGGTCGTGTCAATAGAATTAAACGGTGTGACGTACGAAGGTGTCCTGTTCCCCTCACAGAATGGCAGCGGTCAGAACGGCCACCGGCAAATGGTCTCTTAA
- Protein Sequence
- MRSRRRSIAVSDWLAAGLRGSRALIQLSISGTPINRLPIMAKSVLDLYELYNLVIARGGLVEVINKKLWQEIIKGLRLPSSITSAAFTLRTQYMKYLYDYECEKKNLSTRSELDAAIEGNKREGRRASGQYDAQAALGMPPLNRGVPASLAQLSQHMQPLSLSLGGGVAGVPRLPPLPPHAPHISQHDIEYRVREYMKMIQTQRELMRNGSESPPSVNNGPASMMSPRDAAALSAIDVSRLTLWSLYNNNNNNSPAPDLEPQREALNLSESPNSSTSGGKREACRSPPPPAKRRTPRPPSPRLPSPPRQACAPAPAQLNGGTTNGTNGAAFKITTRGDANTGDQQLVVSIELNGVTYEGVLFPSQNGSGQNGHRQMVS
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_00632547;
- 90% Identity
- iTF_00361395; iTF_01443617; iTF_00632547; iTF_01428835; iTF_00250246; iTF_00913394; iTF_00661062; iTF_00317899; iTF_00699883; iTF_00698053; iTF_00703719; iTF_00698961; iTF_00702675; iTF_00704733; iTF_00696287; iTF_00697108; iTF_00935467; iTF_00634097; iTF_01161100; iTF_01219567; iTF_01182450; iTF_00124951; iTF_01207896; iTF_01208989; iTF_00825367; iTF_00826607; iTF_00895705; iTF_00909535; iTF_00390147; iTF_00033605; iTF_00926375; iTF_00737256; iTF_00686122; iTF_00649808; iTF_00055185; iTF_01170353; iTF_01171247; iTF_00032690; iTF_00700786; iTF_01172114; iTF_00044244; iTF_00666293; iTF_00662870; iTF_00206779; iTF_00205844; iTF_00648893; iTF_00810781; iTF_00142878; iTF_01335711; iTF_00856386; iTF_00376885; iTF_00321381; iTF_00266968; iTF_00119392;
- 80% Identity
- -