Tobe016558.2
Basic Information
- Insect
- Thera obeliscata
- Gene Symbol
- retn
- Assembly
- GCA_947578465.1
- Location
- OX387913.1:8243540-8249295[+]
Transcription Factor Domain
- TF Family
- ARID
- Domain
- ARID domain
- PFAM
- PF01388
- TF Group
- Helix-turn-helix
- Description
- This domain is know as ARID for AT-Rich Interaction Domain [2], and also known as the BRIGHT domain [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 2 1.5e-19 3.6e-16 59.7 0.0 17 89 91 161 80 161 0.95 2 2 6.1 1.5e+04 -3.1 0.0 25 38 293 306 256 307 0.64
Sequence Information
- Coding Sequence
- ATGATTTACGCGCAGCGCGAGCGCATCAGATCACCGCTTTACGACCCCGTACCAGATTTAGCGCTCTCGGTGTGGCCACTGCGGAAGCCGTTTGTTCTAGTAGATTGTTTGGCCACAGTAGATTTACTCTATGAGGCTCTAAGCTTCCCATGTGTACGTCACAACGACGGAGAAAATGGAATATCGTTAGCCGCCGCGTCTAGTTCCACTTTGGGAAAGCTTCAGAAAAAGTACAGTTTTTCGATATCTAATATAAATCTCATTGTTCCAGGCACTCCAATAAACCGGCTGCCAATAATGGCCAAGTCCGTGTTGGACCTCTACGAGCTGTATAACCTGGTGATCGCACGCGGTGGCTTGGTCGAGGTGATCAACAAGAAGCTGTGGCAGGAGATCATCAAGGGACTTCGGCTACCGTCTTCCATCACGTCTGCGGCCTTCACTTTGCGCACACAATACATGAAATATCTCTATGACTATGAGTGTGAGAAGAAGAACCTGTCTACCAGAAGCGAGTTGGACGCCGCCATCGAAGGCAACAAGCGAGAAGGAAGACGTGCATCGGGCCAATACGATGCGCAAGCAGCTCTTGGCATGCCGCCTCTCAACCGCGGGGTCCCCGCATCTCTTGCCCAGCTATCCCAGCACATGCAGCCTCTGTCTCTCTCGCTAGGAGGGGGGGTCGCGGGGGTGCCCCGTCTGCCCCCCTTGCCCCCGCATGCCCCGCATATATCCCAGCACGACATCGAGTATAGAGTGAGGGAGTACATGAAGATGATACAGACGCAACGTGAGCTGATGAGAAATGGTTCCGAATCCCCGCCCAGCGTGAACAACCCAGCTTCAATGATGTCTCCACGCGACGCCGCACTCAGCGCCATCGACGTCTCCCGCCTCACTCTATGGTCGCTCTACAACAATAACAACAACAGCCCCGCGCCGGACCTGGAGCCACAACGTGAGGCACTGAACCTCAGTGAGAGCCCGAACTCCAGCACGAGTGGTGGAAAGCGCGAGGCTTGCCGCTCCCCCCCTCCGCCCGCCAAGCGCCGCACCCCCCGACCCCCCTCACCCCGGCTACCCTCCCCCCCAAGACAGGCCTGCGCGCCCGCACCGGCACAGCTGAATGGAGGAACCACTAACGGAACGAATGGAGCAGCGTTCAAAATTACCACCAGAGGTGATGCCAATACGGGAGACCAGCAACTCGTCGTGTCAATAGAATTAAACGGTGTCACATACGAAGGCGTCCTATTCCCCTCACAGAATGGCAACGGTCAGAACGGTCACAGGCAAATGGTCTCCTAA
- Protein Sequence
- MIYAQRERIRSPLYDPVPDLALSVWPLRKPFVLVDCLATVDLLYEALSFPCVRHNDGENGISLAAASSSTLGKLQKKYSFSISNINLIVPGTPINRLPIMAKSVLDLYELYNLVIARGGLVEVINKKLWQEIIKGLRLPSSITSAAFTLRTQYMKYLYDYECEKKNLSTRSELDAAIEGNKREGRRASGQYDAQAALGMPPLNRGVPASLAQLSQHMQPLSLSLGGGVAGVPRLPPLPPHAPHISQHDIEYRVREYMKMIQTQRELMRNGSESPPSVNNPASMMSPRDAALSAIDVSRLTLWSLYNNNNNSPAPDLEPQREALNLSESPNSSTSGGKREACRSPPPPAKRRTPRPPSPRLPSPPRQACAPAPAQLNGGTTNGTNGAAFKITTRGDANTGDQQLVVSIELNGVTYEGVLFPSQNGNGQNGHRQMVS
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_00632547;
- 90% Identity
- iTF_00638435;
- 80% Identity
- -