Hvit024863.2
Basic Information
- Insect
- Horisme vitalbata
- Gene Symbol
- retn
- Assembly
- GCA_951804965.1
- Location
- OX638104.1:6687345-6695064[-]
Transcription Factor Domain
- TF Family
- ARID
- Domain
- ARID domain
- PFAM
- PF01388
- TF Group
- Helix-turn-helix
- Description
- This domain is know as ARID for AT-Rich Interaction Domain [2], and also known as the BRIGHT domain [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 2 5.7e-20 1.7e-16 61.2 0.0 16 89 2 73 1 73 0.95 2 2 6.5 2e+04 -3.1 0.0 25 38 207 220 169 221 0.69
Sequence Information
- Coding Sequence
- ATGAAGGGAACTCCAATAAATAGACTGCCGATAATGGCAAAGTCGGTGCTGGATCTCTACGAGCTGTATAACCTAGTGATCGCACGCGGCGGCTTGGTGGAGGTCATCAACAAGAAGTTGTGGCAGGAGATCATCAAGGGGCTCCGACTGCCGTCTTCCATCACGTCTGCAGCCTTCACTTTACGTACACAATACATGAAATATCTCTACGATTACGAGTGTGAGAAGAAGAACCTGTCCACCAGAAGCGAGCTGGACGCAGCCATAGAAGGAAACAAGCGGGAAGGAAGGCGCGCTTCGGGACAGTACGATGCACAAGCAGCCCTTGGCATGCCACCACTAAACCGCGGGGTTCCCGCCTCGCTGGCTCAGCTTTCCCAGCACATGCAGCCTCTGTCCCTCTCGCTGGGAGGGGGGGTTGCGGGGGTTCCCCGCCTCCCTCCACTGCCCCCCCACGCGCCGCACATATCGCAACACGACATCGAATACAGAGTCAGAGAGTACATGAAGATGATCCAGACGCAACGGGAGCTGATGAGAAATGGTTCAGAGTCCCCTCCCAGTGCCACAAACGGACCAGCCTCCATGATGTCACCTCGCGACGCCGCCGCATTGAGTGCCATTGACGTGTCCCGCCTGACTCTGTGGTCgctctacaacaacaacaataacaacagcccGGCACCAGATCTGGAGCCACAACGTGAGGCCCTCAACCTCAGCGAGAGTCCAAACTCCAGCACGAGCGGTGGGAAGCGTGAGGCCTGCCGCTCCCCCCCTCCCCCGGCAAAGCGTCGTACCCCACGTCCTCCTTCCCCACGGCTACCCTCCCCCCCAAGACAAGCGTGTGCGCCGGCACCGGCCCAGCTGAATGGGGGGGCTACTAATGGATCAAACGGAGCAGCTTTCAAAATTACCACCAGAGgTGACGCAAACACAGGTGATCAGCAACTTGTCGTATCAATAGAATTAAATGGTGTCACGTATGAAGGCGTCTTGTTTCCCTCACAAAATGGCAATGGACAAAACGGCCACAGGCAAATGGTATCCTAA
- Protein Sequence
- MKGTPINRLPIMAKSVLDLYELYNLVIARGGLVEVINKKLWQEIIKGLRLPSSITSAAFTLRTQYMKYLYDYECEKKNLSTRSELDAAIEGNKREGRRASGQYDAQAALGMPPLNRGVPASLAQLSQHMQPLSLSLGGGVAGVPRLPPLPPHAPHISQHDIEYRVREYMKMIQTQRELMRNGSESPPSATNGPASMMSPRDAAALSAIDVSRLTLWSLYNNNNNNSPAPDLEPQREALNLSESPNSSTSGGKREACRSPPPPAKRRTPRPPSPRLPSPPRQACAPAPAQLNGGATNGSNGAAFKITTRGDANTGDQQLVVSIELNGVTYEGVLFPSQNGNGQNGHRQMVS
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_00632547;
- 90% Identity
- iTF_00638435;
- 80% Identity
- -