Hpun031214.2
Basic Information
- Insect
- Hypomecis punctinalis
- Gene Symbol
- retn_1
- Assembly
- GCA_949316475.1
- Location
- OX438813.1:16862430-16868567[-]
Transcription Factor Domain
- TF Family
- ARID
- Domain
- ARID domain
- PFAM
- PF01388
- TF Group
- Helix-turn-helix
- Description
- This domain is know as ARID for AT-Rich Interaction Domain [2], and also known as the BRIGHT domain [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 2 5.1e-20 1.9e-16 61.6 0.0 14 89 11 84 2 84 0.92 2 2 7.3 2.7e+04 -3.0 0.0 25 38 221 234 182 235 0.66
Sequence Information
- Coding Sequence
- atgtacctacagcAGCCGGTCACTTCTGTGAACAACTGTGGCACGCCCATCAACCGACTGCCGATCATGGCCAAGTCAGTGCTGGACCTCTACGAGCTGTACAACTTGGTGATCGCGCGCGGAGGCCTCGTGGAGGTCATCAACAAGAAGCTGTGGCAGGAGATCATCAAGGGCCTCCGGCTGCCGTCTTCGATCACGTCTGCTGCCTTCACGTTACGCACACAATACATGAAGTACCTGTATGACTACGAGTGTGAGAAGAAGAACCTCTCCACTCGGAGCGAGCTGGACGCAGCCATTGAAGGCAACAAGCGGGAAGGAAGACGTGCCTCGGGGCAGTACGACGCGCAAGCCGCTCTCGCCATGCCGCCTCTGAACCGCGGCGTCCCAGCCTCTCTAGCGCAGCTCTCGCAGCACATGCAGCCGCTGTCTCTCTCGCTCGGAGGGGGCGTGGGGGGAGTGGGGGGCGTACCCCGCCTGCCCCCGCTACCCCCGCACGCGCCTCACATCACCCAGCATGACATCGAGTATAGAGTCCGCGAGTACATGAAGATGATACAGACGCAGAGAGAACTGATGAGAAATGGATCTGAATCCCCTCCCAGTGCCACGAACGGCCCCACCCCCATGATGTCTCCGCGGGACGCAGCAGCTCTGAGCGCTATCGACGTGTCGCGGCTCACGCTGTGGTCGCTctacaacaacaacaataacaacagCCCCGCTCCCGCGGACTTAGAGCCTCAACGAGAGGCGCTAAACCTGAGCGAGAGCCCGAACTCAAGCGGCAGCGTGAAGCGCGAGGCGTGCcgctcgccgccgccgcccgccaaGCGACGCACGCCGCGCCCGCCGTCACCGCGGCTGCCGTCACCGCCGCGCCAGGCTTGTGCACCGCCTGCTAGCATCAACGGCACGCAGAATGGCGTCAACGGTGCGGCTTTCAAGATCACTACCAGAGGAGATGCCAACACGGGTGACCAGCAACTCGTCGTGTCGATAGAACTTAACGGAGTGACATACGAAGGCGTCCTCTTTCCCTCACAAAACGGCAACGGACAAAATGGCCACCGGCAAATGGTCTCTTAA
- Protein Sequence
- MYLQQPVTSVNNCGTPINRLPIMAKSVLDLYELYNLVIARGGLVEVINKKLWQEIIKGLRLPSSITSAAFTLRTQYMKYLYDYECEKKNLSTRSELDAAIEGNKREGRRASGQYDAQAALAMPPLNRGVPASLAQLSQHMQPLSLSLGGGVGGVGGVPRLPPLPPHAPHITQHDIEYRVREYMKMIQTQRELMRNGSESPPSATNGPTPMMSPRDAAALSAIDVSRLTLWSLYNNNNNNSPAPADLEPQREALNLSESPNSSGSVKREACRSPPPPAKRRTPRPPSPRLPSPPRQACAPPASINGTQNGVNGAAFKITTRGDANTGDQQLVVSIELNGVTYEGVLFPSQNGNGQNGHRQMVS
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_00142878;
- 90% Identity
- iTF_00638435;
- 80% Identity
- -