Cpec014911.2
Basic Information
- Insect
- Colostygia pectinataria
- Gene Symbol
- retn
- Assembly
- GCA_951394395.1
- Location
- OX596366.1:7331810-7337908[+]
Transcription Factor Domain
- TF Family
- ARID
- Domain
- ARID domain
- PFAM
- PF01388
- TF Group
- Helix-turn-helix
- Description
- This domain is know as ARID for AT-Rich Interaction Domain [2], and also known as the BRIGHT domain [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 1 1.5e-20 3.7e-17 62.9 0.0 7 89 60 140 56 140 0.93
Sequence Information
- Coding Sequence
- atgatttacgcGCTGCGCGAGCGCATCAGATCGCCGCTTTACGACCCCGTACCAGATTTAGCGCACTCCGTGTGGCCACTGCGGAAGCCGTTTGTTCTAGCTGATTGTTTGGCTGCAGTAGATTTACTCTGGATAGtcctagagatttttcatctattCGATCTGATTGATGCTCACGATAAGCTAACCTCTCTTTCAACTCTTTCAGGAACGCCAATAAACCGGCTGCCGATAATGGCGAAGTCAGTTCTCGACCTGTACGAGTTATACAACTTAGTGATAGCGCGCGGCGGCCTCGTCGAGGTGATCAACAAGAAGCTGTGGCAGGAGATCATCAAGGGGCTCCGGCTGCCGTCTTCCATCACGTCTGCAGCCTTCACTTTACGCACACAATACATGAAGTATCTGTACGACTACGAGTGTGAGAAGAAGAACCTGTCCACTAGAAGTGAGCTGGACGCGGCCATTGAAGGAAACAAGCGGGAAGGAAGACGCGCCTCGGGACAGTACGACGCGCAAGCTGCACTTGGCATGCCGCCTCTGAACCGCGGGGTGCCAGCCTCGCTAGCCCAACTCTCCCAGCACATGCAGCCCCTCTCTCTCTCCCTAGGGGGGGTGCCCCGCCTGCCCCCACTGCCCCCACACGCACCCCACATCTCGCAGCACGACATCGAATACCGGGTCCGGGAGTACATGAAAATGATTCAGACGCAACGCGAGCTCATGAGGAatgGTTCAGAATCCCCGCCCAGCGCAGTCAACGGTCCAGCGTCCATGATGTCACCGCGCGATGCTGCAGCTCTTAGTGCTATCGACGTGTCCCGCCTCACTCTGTGGTCGCTgtacaacaacaacaataacaacAGCCCCGCGCCGGACCTGGAGCCACAACGcgaGGCACTCAACCTCAGTGAGAGTCCAAATTCCAGCACGAGTGGTGGAAAGCGAGAGGCTTGCCGATCCCCCCCTCCGCCAGCGAAGCGTCGCACCCCCCGACCCCCCTCACCCCGGCTACCCTCCCCCCCGAGACAAGCCTGCGCACCCGCACCAGCTCAGCTGAACGGAGGAACCACCAATGGAACAAACGGTGCAGCTTTCAAGATCACAACCAGAGgtgATGCCAACACAGGCGATCAACAACTCGTCGTCTCAATAGAACTTAACGGAGTCACATACGAAGGTGTCTTGTTCCCCTCACAAAACGGCAATGGTCAAAACGGTCACAGGCAAATGGTCTCCTAA
- Protein Sequence
- MIYALRERIRSPLYDPVPDLAHSVWPLRKPFVLADCLAAVDLLWIVLEIFHLFDLIDAHDKLTSLSTLSGTPINRLPIMAKSVLDLYELYNLVIARGGLVEVINKKLWQEIIKGLRLPSSITSAAFTLRTQYMKYLYDYECEKKNLSTRSELDAAIEGNKREGRRASGQYDAQAALGMPPLNRGVPASLAQLSQHMQPLSLSLGGVPRLPPLPPHAPHISQHDIEYRVREYMKMIQTQRELMRNGSESPPSAVNGPASMMSPRDAAALSAIDVSRLTLWSLYNNNNNNSPAPDLEPQREALNLSESPNSSTSGGKREACRSPPPPAKRRTPRPPSPRLPSPPRQACAPAPAQLNGGTTNGTNGAAFKITTRGDANTGDQQLVVSIELNGVTYEGVLFPSQNGNGQNGHRQMVS
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_00632547;
- 90% Identity
- iTF_00638435;
- 80% Identity
- -