Arep015502.2
Basic Information
- Insect
- Alcis repandata
- Gene Symbol
- retn
- Assembly
- GCA_949125135.1
- Location
- OX421237.1:9071929-9079602[-]
Transcription Factor Domain
- TF Family
- ARID
- Domain
- ARID domain
- PFAM
- PF01388
- TF Group
- Helix-turn-helix
- Description
- This domain is know as ARID for AT-Rich Interaction Domain [2], and also known as the BRIGHT domain [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 2 6.3e-20 1.6e-16 61.1 0.0 15 89 17 89 11 89 0.93 2 2 6.2 1.6e+04 -3.0 0.0 25 38 223 236 184 237 0.66
Sequence Information
- Coding Sequence
- ATGCCGTTCCTCATCAATACACGAGGAGGGTCGGAGTTTCGAAATTCGCGATTGGGCACACCCATAAACCGACTGCCCATAATGGCCAAGTCAGTCCTGGACCTGTACGAGCTGTACAACCTGGTGATCGCGCGTGGAGGCCTCGTGGAGGTAATCAACAAGAAGCTGTGGCAGGAGATCATTAAGGGCCTCCGGCTGCCGTCTTCGATCACGTCTGCTGCCTTCACGTTACGCACACAATACATGAAGTACCTGTACGACTACGAGTGCGAGAAGAAGAACCTATCCACTCGGAGCGAGCTAGATGCAGCCATTGAAGGCAACAAGCGCGAGGGGAGACGTGCGTCGGGGCAGTACGACGCGCAAGCGGCACTTGCCATGCCGCCCCTGAACCGCGGCGTGCCGGCGTCTCTCGCGCAGCTCTCTCAGCACATGCAGCCTCTCTCGCTGTCCCTCGGAGGGGGGGTAGGGGGGGTACCCAGGCTGCCCCCCTTGCCCCCGCACGCGCCGCACATCAGCCAGCACGATATTGAGTACAGAGTCCGCGAGTACATGAAGATGATACAGACGCAGCGAGAGCTGATGAGAAATGGATCCGAGTCCCCACCCAGTGCCACCAACGGCCCCACCCCGATGATGTCCCCGCGCGACGCGGCGGCGCTGAGCGCGATCGACGTCTCGCGCTTGACTCTGTGGTCACTctacaacaataacaacaacaacagtcCCGCGCCGACTGACCTCGAGCCGCAACGAGAGGCGCTCAACCTGAGTGAGAGCCCGAACTCGAGCACCAGCATCAAGCGTGAGGCGtgccgctcgccgccgccgcctgcgAAACGCCGGACCCCACGCCCGCCTTCGCCGCGTCTCCCCTCGCCGCCGAGGCAAGCATGCGCGCCGCCGCAAACGCAGCTCAATGGCGCGCAGAATGGAGTCAATGGAGCAGCTTTTAAGATCACTACAAGaggtgaTGCTAACACAGGTGACCAACAACTCGTCGTCTCAATAGAACTGAACGGTGTCACATACGAAGGCGTCCTCTTCCCTTCACAAAACGGCAACGGACAAAACGGTCACCGGCAAATGGTCTCTTAA
- Protein Sequence
- MPFLINTRGGSEFRNSRLGTPINRLPIMAKSVLDLYELYNLVIARGGLVEVINKKLWQEIIKGLRLPSSITSAAFTLRTQYMKYLYDYECEKKNLSTRSELDAAIEGNKREGRRASGQYDAQAALAMPPLNRGVPASLAQLSQHMQPLSLSLGGGVGGVPRLPPLPPHAPHISQHDIEYRVREYMKMIQTQRELMRNGSESPPSATNGPTPMMSPRDAAALSAIDVSRLTLWSLYNNNNNNSPAPTDLEPQREALNLSESPNSSTSIKREACRSPPPPAKRRTPRPPSPRLPSPPRQACAPPQTQLNGAQNGVNGAAFKITTRGDANTGDQQLVVSIELNGVTYEGVLFPSQNGNGQNGHRQMVS
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_00142878;
- 90% Identity
- iTF_00638435;
- 80% Identity
- -