Edod015727.1
Basic Information
- Insect
- Eupithecia dodoneata
- Gene Symbol
- retn
- Assembly
- GCA_947044255.1
- Location
- CAMRHC010000096.1:4239268-4246047[-]
Transcription Factor Domain
- TF Family
- ARID
- Domain
- ARID domain
- PFAM
- PF01388
- TF Group
- Helix-turn-helix
- Description
- This domain is know as ARID for AT-Rich Interaction Domain [2], and also known as the BRIGHT domain [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 2 8.9e-21 1.8e-17 63.8 0.0 12 89 6 81 3 81 0.94 2 2 5.2 1.1e+04 -2.8 0.0 25 38 215 228 175 230 0.62
Sequence Information
- Coding Sequence
- ATGGTTTCAGCTCAGGCTCTACAAGAAGAAGGAACCCCAATCAACCGGCTGCCGATAATGGCGAAGTCAGTTCTAGATCTCTACGAGCTGTACAACCTCGTCATCGCCCGCGGTGGTCTCGTGGAGGTCATCAACAAGAAGCTGTGGCAAGAGATCATCAAAGGGCTCCGGCTGCCGTCTTCTATCACGTCTGCAGCCTTCACTTTACGCACACAataCATGAAATACCTGTACGACTATGAATGTGAGAAGAAGAACCTGTCCACCAGAAGTGAGCTGGACGCTGCCATCGAAGGCAACAAGCGTGAAGGGAGGCGAGCCTCGGGCCAGTACGACGCGCAAGCAGCATTGGGCATGCCGCCTATGAACCGCGGGGTGCCCGCCTCGCTCGCACAACTCTCCCAGCACATGCaacctctctctctctccctcGGAGGGGGAGTGGGGGGTGTCCCACGTCTGCCGCCGTTGCCACCGCATGCGCCACATATATCGCAGCACGATATTGAGTACAGAGTCAGAGAGTATATGAAGATGATACAGACGCAGCGTGAATTGATGAGGAATGGTTCAGAATCCCCACCAAGCGTTACCAACGGCCCCACGCCGATGATGTCACCCCGTGACGCGGCCGCTCTCAGCGCCATCGACGTATCCCGCCTGACTCTGTGGTCACTTTACAACAACAATAACAACAACAGCCCTGCACCGGATTTGGAGCCACAACGTGAGGCCCTAAATCTCAGCGAGAGCCCCAACTCGAGCACGAGTGGAGGCAAGCGAGAGGCCTGCCGCTCCCCCCCACCCCCCGCTAAGCGCCGCACCCCGCTTCCCCCCTCACCGCGGCTACCTTCCCCCCCGAGGCAGGCCTGTGCGCCCGCGCCGGCTGCCATGAATGGGGGGACCACTAATGGATCTAATGGTGCGGCCTTTAAGATAACCACCAGAGGTGACGCAAACACGGGAGATCAACAGCTGGTCGTGTCAATAGAACTGAACGGCGTCACGTATGAAGGCGTACTATTCCCCTCACAAAACGGGAACGGGCAAAACGGTCACAGGCAAATGGTATCCTAA
- Protein Sequence
- MVSAQALQEEGTPINRLPIMAKSVLDLYELYNLVIARGGLVEVINKKLWQEIIKGLRLPSSITSAAFTLRTQYMKYLYDYECEKKNLSTRSELDAAIEGNKREGRRASGQYDAQAALGMPPMNRGVPASLAQLSQHMQPLSLSLGGGVGGVPRLPPLPPHAPHISQHDIEYRVREYMKMIQTQRELMRNGSESPPSVTNGPTPMMSPRDAAALSAIDVSRLTLWSLYNNNNNNSPAPDLEPQREALNLSESPNSSTSGGKREACRSPPPPAKRRTPLPPSPRLPSPPRQACAPAPAAMNGGTTNGSNGAAFKITTRGDANTGDQQLVVSIELNGVTYEGVLFPSQNGNGQNGHRQMVS
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_00632547;
- 90% Identity
- iTF_00638435;
- 80% Identity
- iTF_00696287;