Lbim018002.1
Basic Information
- Insect
- Lomographa bimaculata
- Gene Symbol
- retn
- Assembly
- GCA_948107665.1
- Location
- OX403601.1:8086376-8093272[+]
Transcription Factor Domain
- TF Family
- ARID
- Domain
- ARID domain
- PFAM
- PF01388
- TF Group
- Helix-turn-helix
- Description
- This domain is know as ARID for AT-Rich Interaction Domain [2], and also known as the BRIGHT domain [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 2 1.2e-19 2.4e-16 60.2 0.0 17 89 7 77 2 77 0.95 2 2 5.7 1.1e+04 -2.8 0.0 25 38 209 222 169 223 0.61
Sequence Information
- Coding Sequence
- ATGTATCTCCTTGTTCTAGGGACGCCCATCAACCGACTGCCGATTATGGCCAAGTCAGTCCTCGACCTGTACGAGCTGTATAACCTGGTGATAGCGCGCGGCGGTCTCGTGGAGGTCATCAATAAGAAGCTGTGGCAGGAGATCATCAAAGGGCTCCGACTGCCGTCTTCCATCACGTCTGCGGCCTTCACTTTACGCACACAATACATGAAGTACTTGTACGACTATGAGTGCGAGAAGAAGAACCTATCGACTCGCAGTGAGCTAGATGCAGCTATAGAAGGCAACAAGCGGGAAGGCAGGCGTGCTTCAGGACAGTATGACGCTCAAGCTGCTTTGGCTATGCCCCCTCTCAACCGCGGTGTGCCAGCCTCTCTGGCTCAGCTCTCGCAGCACATGCAGCCCCTCTCGCTCTCCCTCGGAGGGGGTGGGGTGCCGAGGTTGCCGCCTCTGCCCCCCCACGCGCCACACATCGGCCAGCAGGAGATTGAGTACAGAGTCCGGGAGTATATGAAGATGATACAGACGCAGCGGGAGCTTATGAGGAATGGCTCAGAATCCCCGCCCAGCGTCACCAACGGCCCCACGCCGATGATGTCCCCCCGCGACGCGGCCGCTCTCAGCGCCATCGACGTGTCGCGCCTCACTCTCTGGTCCCTCTACAACAACAATAACAACAACAGCCCCGCGCCGACGGACCTCGAGCCGCAACGGGAGGCCCTGAACCTGAGTGAGAGCCCCAACTCCAGCGTCAGTGTCAAGCGTGAGGCGTGCCGTTCCCCTCCACCCCCCGCGAAACGTCGCACCCCCCGACCTCCCTCCCCGAGACCCTCCCCCCCAAGACAGGCCTGTGCGCCCCCCACGCAGATCAACGGCACGCCTAATGGAGTCAATGGAGCTGCTTTCAAGATTACTACGAGAGGTGATGCAAACACAGGCGACCAGCAGCTCGTGGTGTCAATAGAATTGAACGGAGTGACGTACGAAGGTGTCCTTTTCCCATCACAAAACGGCAACGGACAAAACGGACACCGGCAAATGGTGTCCTAA
- Protein Sequence
- MYLLVLGTPINRLPIMAKSVLDLYELYNLVIARGGLVEVINKKLWQEIIKGLRLPSSITSAAFTLRTQYMKYLYDYECEKKNLSTRSELDAAIEGNKREGRRASGQYDAQAALAMPPLNRGVPASLAQLSQHMQPLSLSLGGGGVPRLPPLPPHAPHIGQQEIEYRVREYMKMIQTQRELMRNGSESPPSVTNGPTPMMSPRDAAALSAIDVSRLTLWSLYNNNNNNSPAPTDLEPQREALNLSESPNSSVSVKREACRSPPPPAKRRTPRPPSPRPSPPRQACAPPTQINGTPNGVNGAAFKITTRGDANTGDQQLVVSIELNGVTYEGVLFPSQNGNGQNGHRQMVS
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_00142878;
- 90% Identity
- iTF_00638435;
- 80% Identity
- -