Ealt015850.1
Basic Information
- Insect
- Epirrhoe alternata
- Gene Symbol
- retn
- Assembly
- GCA_963565295.1
- Location
- OY751392.1:7885713-7894023[+]
Transcription Factor Domain
- TF Family
- ARID
- Domain
- ARID domain
- PFAM
- PF01388
- TF Group
- Helix-turn-helix
- Description
- This domain is know as ARID for AT-Rich Interaction Domain [2], and also known as the BRIGHT domain [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 2 5.3e-20 1.2e-16 61.4 0.0 15 89 22 94 14 94 0.93 2 2 7.3 1.7e+04 -3.1 0.0 25 38 224 237 187 239 0.71
Sequence Information
- Coding Sequence
- ATGCTTTTAGCGGATCGAGTGAGTCGTCATGTGGATGGTCTGTGTGGGCTCTGCTGTTTGGTAGAGGCAGGAACCCCTATAAATCGGCTGCCGATTATGGCCAAGTCTGTGTTGGACCTCTACGAGCTGTACAACCTGGTGATCGCTCGCGGTGGCCTGGTGGAGGTGATCAATAAGAAACTGTGGCAGGAGATCATCAAGGGGCTTCGGCTGCCATCTTCCATCACGTCTGCAGCGTTCACGCTGCGTACACAGTATATGAAATATCTGTACGACTACGAGTGCGAGAAGAAGAATTTGTCGACTCGCAGCGAGCTGGACGCAGCCATCGAAGGCAACAAGCGGGAGGGGAGACGCGCCTCGGGGCAGTATGACGCACAGGCTGCACTGGGCATGCCTCCACTGAACCGCGGGGTACCTGCCTCGCTCGCACAACTATCTCAGCATATGCAGCCTCTCTCTCTCTCACTGGGAGGGGGGGTGCCTCGTCTGCCTCCGCTGCCCCCGCATGCCCCGCACATCTCACAACATGACATCGAATATAGAGTTAGGGAGTACATGAAGATGATACAGACACAAAGGGAGCTGATGAGAACCGGTTCAGAATCCCCGCCAAGCGCGAACGGCCCCGCGTCCATGATGTCCCCACGTGACGCCGCAGCGCTCAGTGCCATCGATGTCTCCCGCCTCACGCTCTGGTCTCTCTACAACAACAATAATAACAACAGCCCTGCGACTGACCTGGAGCCACAACGTGAGGCACTTAATCTCAGTGAGAGTCCAAACTCGAGCACAAGCGGCAAGCGTGAAGCCTGCCGCTCTCCGCCTCCGCCGGCGAAGCGCCGCACGCCCTTGCCCCCTTCCCCGCGGCTGCCTTCTCCCCCGCGACAGGCCTGCGTGCCCGCACCACAGATGAACGGAGGCACTCCCAATGGAACTAATGGTGCCGCTTTCAAGATTACAACTAGagGTGATGCTAACACAGGCGACCAGCAACTCGTTGTATCAATAGAACTGAACGGTGTCACATATGAAGGCGTCCTATTCCCCTCACAAAACGGCAACGGTCAGAACGGTCACAGGCAGATGGTGTCCTAA
- Protein Sequence
- MLLADRVSRHVDGLCGLCCLVEAGTPINRLPIMAKSVLDLYELYNLVIARGGLVEVINKKLWQEIIKGLRLPSSITSAAFTLRTQYMKYLYDYECEKKNLSTRSELDAAIEGNKREGRRASGQYDAQAALGMPPLNRGVPASLAQLSQHMQPLSLSLGGGVPRLPPLPPHAPHISQHDIEYRVREYMKMIQTQRELMRTGSESPPSANGPASMMSPRDAAALSAIDVSRLTLWSLYNNNNNNSPATDLEPQREALNLSESPNSSTSGKREACRSPPPPAKRRTPLPPSPRLPSPPRQACVPAPQMNGGTPNGTNGAAFKITTRGDANTGDQQLVVSIELNGVTYEGVLFPSQNGNGQNGHRQMVS
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_00632547;
- 90% Identity
- iTF_00638435;
- 80% Identity
- -