Cleg007535.1
Basic Information
- Insect
- Chesias legatella
- Gene Symbol
- retn
- Assembly
- GCA_947359385.1
- Location
- OX375776.1:6629436-6635941[+]
Transcription Factor Domain
- TF Family
- ARID
- Domain
- ARID domain
- PFAM
- PF01388
- TF Group
- Helix-turn-helix
- Description
- This domain is know as ARID for AT-Rich Interaction Domain [2], and also known as the BRIGHT domain [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 2 5.6e-17 1e-13 51.5 0.1 29 89 4 62 1 62 0.93 2 2 3.8 7e+03 -2.4 0.0 25 38 195 208 156 214 0.68
Sequence Information
- Coding Sequence
- ATGGCAAAGTCAGTTCTGGATCTGTACGAACTTTACAATCTGGTGATCGCTCGAGGCGGGCTGGTTGAGGTGATCAACAAGAAACTGTGGCAGGAAATCATTAAAGGACTCCGGCTGCCGTCTTCCATCACGTCTGCGGCCTTCACTTTACGCACACAATACATGAAATATCTGTACGACTATGAGTGCGAGAAGAAGAACCTCTCCACTAGAAGCGAGCTAGACGCCGCCATAGAAGGCAACAAGCGGGAGGGAAGGCGCGCTTCCGGACAGTACGACGCACAAGCTGCTCTTGGCATGTCACCGCTCAACCGCGGGGTGCCCGCCTCGCTCGCGCAACTCTCCCAGCACATGCAGCCCCTCTCGCTGTCTCTCGGGGGAGGGGTCGCGGGGGTCCCCCGTCTCCCCCCGCTGCCCCCCCACGCACCCCACATCTCCCAGCACGACATTGAATACAGAGTCAGAGAGTACATGAAGATGATCCAGACGCAACGGGAACTCATGAGAAACGGTTCAGAGTCTCCTCCGAGCGCCAACGGACCGGCCTCGATGATGTCTCCCCGAGACGCGGCCGCACTCAGCGCCATCGACGTGTCCCGCCTCACTCTGTGGTCGCTCTACAACAACAATAACAATAACAACAGCCCGCAGCCAGAACTGGAGCCACAACGTGAGGCGCTGAATCTGTCGGAGAGTCCGAACTCGAGCACCAGCGGCGGCAAGCGCGAGGCGTGCCGCTCCCCCCCTCCGCCCGCGAAGCGCCGCACCCCCCGCCCGCCCTCCCCGCGGCCGCCCTCACCCCAGCGCCACTCGTGCACCCCGACACAGGCACAGCTCAATGGATCCCCTAACGGAGTCAACGGGGCAGCCTTCAAGATTACTACTAGAGGTGATGCAAACACAGGAGACCAGCAGCTCGTCGTTTCAATAGAATTAAATGGAGTCACATACGAAGGCGTCCTGTTCCCCTCGCAAAACGGAAACGGACAAAACGGCCACAGGCAGATGGTATCTTAA
- Protein Sequence
- MAKSVLDLYELYNLVIARGGLVEVINKKLWQEIIKGLRLPSSITSAAFTLRTQYMKYLYDYECEKKNLSTRSELDAAIEGNKREGRRASGQYDAQAALGMSPLNRGVPASLAQLSQHMQPLSLSLGGGVAGVPRLPPLPPHAPHISQHDIEYRVREYMKMIQTQRELMRNGSESPPSANGPASMMSPRDAAALSAIDVSRLTLWSLYNNNNNNNSPQPELEPQREALNLSESPNSSTSGGKREACRSPPPPAKRRTPRPPSPRPPSPQRHSCTPTQAQLNGSPNGVNGAAFKITTRGDANTGDQQLVVSIELNGVTYEGVLFPSQNGNGQNGHRQMVS
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_00632547;
- 90% Identity
- iTF_00638435;
- 80% Identity
- -