Amar008631.1
Basic Information
- Insect
- Agriopis marginaria
- Gene Symbol
- retn
- Assembly
- GCA_932301435.1
- Location
- CAKOAR010000066.1:3077949-3087932[+]
Transcription Factor Domain
- TF Family
- ARID
- Domain
- ARID domain
- PFAM
- PF01388
- TF Group
- Helix-turn-helix
- Description
- This domain is know as ARID for AT-Rich Interaction Domain [2], and also known as the BRIGHT domain [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 2 3.3e-20 7.6e-17 61.8 0.0 14 89 7 80 4 80 0.93 2 2 4.9 1.1e+04 -2.8 0.0 25 38 214 227 174 228 0.61
Sequence Information
- Coding Sequence
- ATGCCACTCCTCATCAATAAACGAGGAGGCACGCCTATCAACCGGCTGCCCATCATGGCCAAGTCTGTTCTGGACCTCTACGAGCTGTATAACCTGGTGATCGCGCGTGGAGGCCTCGTGGAGGTTATTAACAAGAAGCTCTGGCAGGAGATCATCAAGGGCCTCCGGCTGCCGTCTTCGATCACGTCTGCTGCCTTCACGTTACGCACACAATACATGAAGTACCTGTACGACTACGAGTGTGAGAAGAAGAACCTATCCACTCGGAGTGAGCTGGACGCAGCTATTGAAGGCAACAAGCGGGAAGGAAGACGCGCTTCTGGACAGTATGATGCGCAAGCGGCACTTGCCATGCCTCCTCTGAACCGCGGCGTGCCGGCGTCTCTCGCGCAGCTCTCCCAGCACATGCAGCCGCTCTCGTTGTCCCTCGGAGGAGGGGTGGGGGGCGTACCCAGGCTGCCCCCCTTGCCCCCACATGCACCGCACATCAGCCAGCACGATATTGAATACAGAGTCCGCGAATACATGAAGATGATACAGACACAGCGGGAGCTTATGAGAAATGGATCAGAATCCCCGCCCAGTGTGACGAATGGTCCAACGCCGATGATGTCTCCACGTGACGCGGCAGCGCTGAGCGCGATCGACGTATCACGCCTGACGCTCTGGTCTCTCTACAATAACAACAACAACAGTCCGGCGCCGACAGACCTGGAGCCACAACGAGAGGCGCTCAACCTGAGCGAGAGCCCAAACTCCAGCACCAGCATCAAGCGCGAGGCGTGCCGCTCGCCCCCGCCCCCCGCGAAGCGCCGCACCCCGCGCCCGCCCTCACCGCGGCTTCCGTCGCCGCCGAGGCAGGCATGCGCGCCGCCGCAGACGCAGCTCAATGGCACTCAAAATGGAGTCAATGGAGCAGCATTTAAGATCACTACGAGAGGTGATGCAAACACAGGCGACCAGCAACTCGTCGTCTCGATAGAACTTAACGGCGTCACATACGAAGGCGTCCTTTTCCCCTCACAAAACGGCAATGGACAAAACGGCCATCGGCAAATGGTATCTTAA
- Protein Sequence
- MPLLINKRGGTPINRLPIMAKSVLDLYELYNLVIARGGLVEVINKKLWQEIIKGLRLPSSITSAAFTLRTQYMKYLYDYECEKKNLSTRSELDAAIEGNKREGRRASGQYDAQAALAMPPLNRGVPASLAQLSQHMQPLSLSLGGGVGGVPRLPPLPPHAPHISQHDIEYRVREYMKMIQTQRELMRNGSESPPSVTNGPTPMMSPRDAAALSAIDVSRLTLWSLYNNNNNSPAPTDLEPQREALNLSESPNSSTSIKREACRSPPPPAKRRTPRPPSPRLPSPPRQACAPPQTQLNGTQNGVNGAAFKITTRGDANTGDQQLVVSIELNGVTYEGVLFPSQNGNGQNGHRQMVS
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_00632547;
- 90% Identity
- iTF_00638435;
- 80% Identity
- -