Eabb014237.1
Basic Information
- Insect
- Eupithecia abbreviata
- Gene Symbol
- retn
- Assembly
- GCA_943735975.1
- Location
- CALSER010000129.1:171652-178392[-]
Transcription Factor Domain
- TF Family
- ARID
- Domain
- ARID domain
- PFAM
- PF01388
- TF Group
- Helix-turn-helix
- Description
- This domain is know as ARID for AT-Rich Interaction Domain [2], and also known as the BRIGHT domain [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 2 9.7e-20 2.1e-16 60.3 0.0 17 89 26 96 19 96 0.94 2 2 5.6 1.2e+04 -3.0 0.0 25 38 230 243 191 244 0.64
Sequence Information
- Coding Sequence
- ATGACGTGCCTAATGCGGAACAGCCTGATGATTGGGCTGATTTATTGGCGGAAGGAAGCGGGGTGTAGCTGCCCTGGAACCCCAATCAACCGGCTGCCGATAATGGCGAAGTCAGTTCTAGATCTCTACGAGCTGTACAACCTCGTCATCGCCCGCGGTGGTCTCGTGGAGGTTATCAACAAGAAGCTGTGGCAAGAGATCATCAAGGGGCTCCGGCTGCCGTCTTCTATCACGTCTGCAGCCTTCACTTTACGCACACAATATATGAAATACCTATACGACTATGAATGTGAGAAGAAGAACCTGTCCACCAGAAGTGAGCTGGACGCTGCCATCGAAGGCAACAAGCGTGAAGGGAGGCGCGCCTCGGGCCAGTACGACGCGCAAGCAGCATTGGGCATGCCGCCTATGAACCGCGGGGTGCCCGCCTCGCTCGCACAACTCTCCCAGCACATGCAACCTCTCTCTCTCTCCCTCGGAGGGGGAGTGGGGGGTGTCCCACGCCTGCCGCCGTTGCCACCGCATGCGCCACATATATCGCAGCACGATATCGAGTACAGAGTCAGAGAGTATATGAAGATGATACAGACGCAGCGTGAATTGATGAGGAATGGTTCAGAATCTCCACCAAGCGTTACCAACGGCCCCACGCCCATGATGTCACCCCGGGACGCTGCCGCTCTCAGCGCCATCGACGTATCCCGCCTGACTCTGTGGTCACTCTACAATAACAATAACAACAACAGCCCTGCACCGGATTTGGAGCCACAACGTGAGGCCCTAAACCTCAGCGAGAGCCCCAACTCGAGCACGAGTGGAGGCAAGCGAGAGGCCTGCCGCTCCCCCCCACCCCCCGCTAAGCGCCGCACCCCGCTTCCCCCCTCACCGCGGCTGCCTTCCCCCCCGAGGCAGGCCTGTGCCCCCGCGCCGGCTGCCATGAATGGGGGGACCACTAATGGATCTAATGGAGCGGCCTTTAAGATTACCACCAGAGGCGACGCAAACACCGGAGATCAACAGCTGGTCGTGTCAATAGAACTGAACGGCGTCACGTATGAAGGCGTACTGTTCCCCTCACAAAACGGGAACGGGCAAAACGGTCACAGGCAAATGGTATCCTAA
- Protein Sequence
- MTCLMRNSLMIGLIYWRKEAGCSCPGTPINRLPIMAKSVLDLYELYNLVIARGGLVEVINKKLWQEIIKGLRLPSSITSAAFTLRTQYMKYLYDYECEKKNLSTRSELDAAIEGNKREGRRASGQYDAQAALGMPPMNRGVPASLAQLSQHMQPLSLSLGGGVGGVPRLPPLPPHAPHISQHDIEYRVREYMKMIQTQRELMRNGSESPPSVTNGPTPMMSPRDAAALSAIDVSRLTLWSLYNNNNNNSPAPDLEPQREALNLSESPNSSTSGGKREACRSPPPPAKRRTPLPPSPRLPSPPRQACAPAPAAMNGGTTNGSNGAAFKITTRGDANTGDQQLVVSIELNGVTYEGVLFPSQNGNGQNGHRQMVS
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_00632547;
- 90% Identity
- iTF_00638435;
- 80% Identity
- iTF_00698053;