Pchl018833.2
Basic Information
- Insect
- Petrophora chlorosata
- Gene Symbol
- retn
- Assembly
- GCA_951640565.1
- Location
- OX621205.1:6110682-6119548[-]
Transcription Factor Domain
- TF Family
- ARID
- Domain
- ARID domain
- PFAM
- PF01388
- TF Group
- Helix-turn-helix
- Description
- This domain is know as ARID for AT-Rich Interaction Domain [2], and also known as the BRIGHT domain [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 2 7.3e-20 2.2e-16 60.9 0.0 16 89 15 86 10 86 0.94 2 2 6.1 1.8e+04 -3.0 0.0 25 38 220 233 181 234 0.64
Sequence Information
- Coding Sequence
- ATGATTAACTGTAGACAGGAAGACGGATTGACAAATAGTCGTTTAGGGACCCCTATCAACCGACTGCCCATCATGGCCAAGTCAGTTCTCGACCTGTACGAGCTGTACAACCTGGTGATAGCTCGCGGCGGCCTCGTCGAGGTCATCAACAAGAAGCTGTGGCAGGAGATCATCAAAGGGCTCCGGCTGCCGTCTTCTATCACGTCTGCAGCCTTCACTTTACGCACACAATACATGAAGTACCTGTATGACTACGAGTGTGAGAAGAAGAACCTTTCCACTCGCAGTGAGCTGGACGCAGCTATAGAAGGCAACAAGCGTGAGGGGAGACGCGCGTCGGGACAGTATGACGCTCAGGCGGCATTGGCTATGCCTCCCCTCAACCGCGGGGTGCCAGCCTCTCTCGCCCAGCTCTCGCAGCACATGCAgcctctctccctctctctagGAGGGGGGGTGGGGGGAGTGCCGAGGTTGCCCCCTCTTCCGCCGCATGCACCGCACATCAGCCAGCATGATATAGAGTACAGGGTGCGGGAGTATATGAAGATGATTCAGACACAGAGGGAGCTTATGAGAAATGGTTCAGAGTCCCCACCGAGCGTCACTAACGGCCCTACTCCCATGATGTCCCCCCGGGACGCCGCCGCTCTCAGCGCCATCGACGTGTCGCGCCTCACTCTGTGGTCTCTGtacaacaacaataataacaacagtCCCGCGCCGACCGATCTGGAGCCGCAACGAGAGGCTCTCAACCTCAGCGAGAGTCCCAACTCAAGcgccagcggcggcggcggcggcggcaagcGCGAGGCGTgccgctcgccgccgccgcccgccaagCGCCGCACCCCGCGCCCCCCCTCGCCGCGCTTGCCCTCACCCCCACGGCAAGCCTGCGCGCCGCCGCAGACACAGATCAATGGGACACCTAATAGTGTTAATGGAGCAGCTTTCAAGATCACTACAAGAGGTGATGCAAACACAGGTGACCAGCAACTTGTCGTGTCAATAGAACTGAACGGCGTCACATACGAAGGCGTCCTCTTCCCCTCACAAAATGGCAACGGACAGAACGGCCACCGGCAAATGGTCTCCTAA
- Protein Sequence
- MINCRQEDGLTNSRLGTPINRLPIMAKSVLDLYELYNLVIARGGLVEVINKKLWQEIIKGLRLPSSITSAAFTLRTQYMKYLYDYECEKKNLSTRSELDAAIEGNKREGRRASGQYDAQAALAMPPLNRGVPASLAQLSQHMQPLSLSLGGGVGGVPRLPPLPPHAPHISQHDIEYRVREYMKMIQTQRELMRNGSESPPSVTNGPTPMMSPRDAAALSAIDVSRLTLWSLYNNNNNNSPAPTDLEPQREALNLSESPNSSASGGGGGGKREACRSPPPPAKRRTPRPPSPRLPSPPRQACAPPQTQINGTPNSVNGAAFKITTRGDANTGDQQLVVSIELNGVTYEGVLFPSQNGNGQNGHRQMVS
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_00142878;
- 90% Identity
- iTF_00638435;
- 80% Identity
- -