Etri021702.2
Basic Information
- Insect
- Eupithecia tripunctaria
- Gene Symbol
- retn
- Assembly
- GCA_955876795.1
- Location
- OY041616.1:9791167-9797407[+]
Transcription Factor Domain
- TF Family
- ARID
- Domain
- ARID domain
- PFAM
- PF01388
- TF Group
- Helix-turn-helix
- Description
- This domain is know as ARID for AT-Rich Interaction Domain [2], and also known as the BRIGHT domain [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 2 8.5e-20 2.1e-16 61.0 0.0 15 89 20 92 15 92 0.94 2 2 8.4 2.1e+04 -3.1 0.0 25 38 226 239 188 240 0.68
Sequence Information
- Coding Sequence
- ATGACGTGCCTAATGCGGAACAGCCCGATGATTGGGCTGATTTATTGGCGGAAGGAAGCGGGTGGTACTCCAATAAACCGGCTGCCGATAATGGCGAAGTCAGTTCTAGATCTCTACGAGCTGTACAACCTCGTCATCGCCCGTGGAGGCCTCGTGGAGGTCATCAACAAGAAGCTGTGGCAAGAGATCATCAAAGGGCTCCGGCTGCCGTCTTCTATCACGTCTGCTGCCTTCACTTTACGCACACAATACATGAAATACCTGTACGACTATGAATGTGAGAAGAAGAACCTGTCCACCAGAAGTGAGCTGGACGCTGCCATCGAAGGCAACAAGCGTGAAGGGAGGCGTGCTTCGGGCCAGTACGACGCGCAAGCCGCATTGGGCATGCCGCCTATGAACCGCGGGGTGCCTGCCTCGCTCGCACAGCTCTCCCAGCACATGCAGCCTCTCTCTCTTTCCCTTGGAGGGGGAGTGGGGGGTGTTCCACGCctgccgccgctgccgccgcacgcgccgcaTATATCGCAGCACGATATAGAGTACAGAGTCAGAGAGTATATGAAGATGATACAGACGCAGCGTGAATTGATGAGGAATGGTTCTGAATCCCCACCCAGCGCAACCAACGGCCCCACACCCATGATGTCTCCTCGTGACGCTGCCGCCCTCAGCGCCATCGACGTATCCCGACTGACTCTCTGGTCGCTCTACAACAATAACAACAACAACAGCCCAGCACCGGACTTGGAGCCACAACGTGAGGCTCTAAACCTCAGCGAGAGCCCCAACTCAAGCACGAGTGGCGGCAAGCGCGAGGCCTGCCGCTCCCCCCAACCCCCCGCTAAGCGCCGCACCCCGCTGCCCCCCTCGCCGCGACTGCCCTCCCCCCCAAGACAAGCCTGTGCGCCTGTGCCGGCTGCCATGAATGGGGGGACCACGAATGGGTCTAATGGAGCAGCTTTTAAGATTACCACCAGAGGTGACGCAAATACGGGAGATCAACAGCTGGTTGTGTCAATAGAACTGAATGGTGTCACGTATGAAGGCGTTCTATTCCCCTCACAAAATGGCAGCGGGCAAAACGGCCATAGGCAAATGGTTTCCTAA
- Protein Sequence
- MTCLMRNSPMIGLIYWRKEAGGTPINRLPIMAKSVLDLYELYNLVIARGGLVEVINKKLWQEIIKGLRLPSSITSAAFTLRTQYMKYLYDYECEKKNLSTRSELDAAIEGNKREGRRASGQYDAQAALGMPPMNRGVPASLAQLSQHMQPLSLSLGGGVGGVPRLPPLPPHAPHISQHDIEYRVREYMKMIQTQRELMRNGSESPPSATNGPTPMMSPRDAAALSAIDVSRLTLWSLYNNNNNNSPAPDLEPQREALNLSESPNSSTSGGKREACRSPQPPAKRRTPLPPSPRLPSPPRQACAPVPAAMNGGTTNGSNGAAFKITTRGDANTGDQQLVVSIELNGVTYEGVLFPSQNGSGQNGHRQMVS
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_00632547;
- 90% Identity
- iTF_00638435;
- 80% Identity
- -