Pfla014789.1
Basic Information
- Insect
- Perizoma flavofasciatum
- Gene Symbol
- retn
- Assembly
- GCA_958496245.1
- Location
- OY292437.1:4176355-4181880[-]
Transcription Factor Domain
- TF Family
- ARID
- Domain
- ARID domain
- PFAM
- PF01388
- TF Group
- Helix-turn-helix
- Description
- This domain is know as ARID for AT-Rich Interaction Domain [2], and also known as the BRIGHT domain [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 2 7e-20 2.1e-16 60.5 0.0 17 89 19 89 12 89 0.94 2 2 4.4 1.3e+04 -3.0 0.0 25 38 223 236 184 237 0.65
Sequence Information
- Coding Sequence
- ATGATCAATGACGTTTACAAGGATGACCCAATAATGACAGATTCAGAAACTTTTGGAACTCCAATAAACCGACTGCCGATAATGGCGAAGTCAGTGCTAGACCTCTATGAGTTGTACAACCTGGTGATCGCACGCGGTGGCTTGGTGGAGGTCATCAACAAGAAGCTGTGGCAGGAAATCATCAAGGGGCTTCGATTGCCGTCTTCCATCACGTCTGCGGCCTTCACTTTACGCACACAATACATGAAATATCTCTACGACTATGAATGTGAGAAGAAGAACCTGTCCACTAGAAGTGAGTTGGATGCAGCCATTGAAGGCAACAAGCGGGAAGGAAGGCGCGCCTCGGGCCAGTATGATGCGCAGGCAGCTCTTGGCATGCCGCCACTTAACCGCGGGGTTCCTGCCTCGCTCGCACAGCTCTCCCAGCACATGCAGCCTCTCTCCCTCTCTCTAGGAGGGGGGGTTGCTGGGGTCCCCCGTCTGCCTCCGCTGCCCCCACACGCGCCGCACATCTCTCAGCACGATATCGAGTACAGAGTCAGAGAGTACATGAAGATGATACAGACGCAACGGGAGCTGATGAGAAATGGTTCAGAGTCCCCTCCAAGTGTCACGAATGGCCCAACCTCAATGATGTCGCCCCGCGACGCGGCCGCGTTGAGCGCCATCGACGTGTCCCGCCTGACTCTGTGGTCACTCTACAACAACAACAATAACAACAGCCCGGCGCCGGACCTCGAGCCACAACGTGAGGCACTTAACCTAAGCGAGAGCCCTAACTCCAGCACGAGCGGTGGAAAGCGCGAGGCTTGCCGCTCCCCTCCTCCACCAGCCAAGCGCCGCACCCCCCGACCCCCCTCCCCCCGGCTACCCTCACCCCCGAGACAAGCCTGCGCGCCAGCCCCGGCCCAGCTAAACGGAGGGACCCCTAATGGAACAAATGGAGCGGCATTCAAGATCACTACCAGAGgtGATGCAAGCACAGGAGACCAGCAACTCGTCGTGTCAATAGAATTAAATGGCGTCACATATGAAGGCGTCTTATTCCCCTCACAAAACGGCAACGGTCAAAATGGCCACAGGCAAATGGTCTCTTAA
- Protein Sequence
- MINDVYKDDPIMTDSETFGTPINRLPIMAKSVLDLYELYNLVIARGGLVEVINKKLWQEIIKGLRLPSSITSAAFTLRTQYMKYLYDYECEKKNLSTRSELDAAIEGNKREGRRASGQYDAQAALGMPPLNRGVPASLAQLSQHMQPLSLSLGGGVAGVPRLPPLPPHAPHISQHDIEYRVREYMKMIQTQRELMRNGSESPPSVTNGPTSMMSPRDAAALSAIDVSRLTLWSLYNNNNNNSPAPDLEPQREALNLSESPNSSTSGGKREACRSPPPPAKRRTPRPPSPRLPSPPRQACAPAPAQLNGGTPNGTNGAAFKITTRGDASTGDQQLVVSIELNGVTYEGVLFPSQNGNGQNGHRQMVS
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_00632547;
- 90% Identity
- iTF_00638435;
- 80% Identity
- -