Aaes019181.2
Basic Information
- Insect
- Alsophila aescularia
- Gene Symbol
- retn
- Assembly
- GCA_946251895.1
- Location
- CAMIUG010000842.1:289252-300945[+]
Transcription Factor Domain
- TF Family
- ARID
- Domain
- ARID domain
- PFAM
- PF01388
- TF Group
- Helix-turn-helix
- Description
- This domain is know as ARID for AT-Rich Interaction Domain [2], and also known as the BRIGHT domain [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 2 6.8e-20 1.9e-16 61.2 0.0 4 89 15 98 13 98 0.92 2 2 6.6 1.8e+04 -2.9 0.0 25 38 232 245 192 246 0.61
Sequence Information
- Coding Sequence
- ATGCCAAGTGGAAGTGCAAAGTGTGCGGGGAACCTGTGCCATAGTTTTGCACAGGAAATCATAAGTTGCGTACAAATATTTCGTACTCCAATCAACCGGCTTCCCATCATGGCCAAGTCAGTCCTGGACCTGTACGAGCTGTACAACTTGGTGATAGCTCGTGGCGGCCTCGTGGAGGTCATCAACAAGAAGCTGTGGCAGGAGATCATCAAGGGCCTCCGGCTGCCATCTTCCATCACGTCTGCAGCCTTCACTTTACGCACGCAATACATGAAGTACCTCTACGACTATGAGTGTGAGAAGAAGAACCTGTCCACTCGCAGTGAGCTAGACGCCGCTATAGAAGGCAACAAGCGGGAAGGAAGACGTGCTTCTGGACAGTACGACGCTCAGGCGGCGCTTGCTATGCCGTCGCTCAACCGCGGGGTGCCCGCATCTCTTGCACAGCTCTCCCAGCACATGCAGCCCCTCTCGCTCTCCCTCGGAGGGGGAGTGGGGGGCGTGCCCCGGCTGCCCCCGCTGCCGCCACACGCGCCGCACATTAGCCAGCACGATATAGAGTACAGGGTGCGGGAGTACATGAAGATGATTCAGACGCAAAGAGAACTTATGAGGAATGGATCAGAATCCCCGCCCAGTGTCAGCAACGGTCCCACGCCGATGATGTCGCCACGCGACGCCGCCGCCCTCAGCGCCATCGACGTCTCGCGCCTGACGCTGTGGTCTCTGTACAACAATAACAACAACAACAGTCCGGCGCCGATCGACCTCGAGCCACAACGAGAGGCTCTCAACCTGAGTGAGAGTCCGAACTCCAGCACGAGCATCAAGCGCGAGGCGTGTCGCTCCCCCCCGCCCCCCGCCAAGCGCCGCACCCCTCTGCCCCCCTCGCCACGGCTCCCCTCCCCGCCGCGGCAGGCGTGCGCGCCGCCGCAGGCGCAGCTCAATGGTACACCCAATGGAGCAGCTTTTAAGATCACTACAAGAGGTGATGCAAACACAGGCGACCAACAGCTCGTCGTATCAATAGAACTGAACGGCGTCACATACGAAGGTGTCCTCTTTCCCTCACAAAACGGGAACGGGCAAAATGGCCACCGGCAAATGGTCTCCTAA
- Protein Sequence
- MPSGSAKCAGNLCHSFAQEIISCVQIFRTPINRLPIMAKSVLDLYELYNLVIARGGLVEVINKKLWQEIIKGLRLPSSITSAAFTLRTQYMKYLYDYECEKKNLSTRSELDAAIEGNKREGRRASGQYDAQAALAMPSLNRGVPASLAQLSQHMQPLSLSLGGGVGGVPRLPPLPPHAPHISQHDIEYRVREYMKMIQTQRELMRNGSESPPSVSNGPTPMMSPRDAAALSAIDVSRLTLWSLYNNNNNNSPAPIDLEPQREALNLSESPNSSTSIKREACRSPPPPAKRRTPLPPSPRLPSPPRQACAPPQAQLNGTPNGAAFKITTRGDANTGDQQLVVSIELNGVTYEGVLFPSQNGNGQNGHRQMVS
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_00142878;
- 90% Identity
- iTF_00638435;
- 80% Identity
- -