Edef020397.1
Basic Information
- Insect
- Erannis defoliaria
- Gene Symbol
- retn
- Assembly
- GCA_905404285.1
- Location
- FR990087.1:12231667-12244438[-]
Transcription Factor Domain
- TF Family
- ARID
- Domain
- ARID domain
- PFAM
- PF01388
- TF Group
- Helix-turn-helix
- Description
- This domain is know as ARID for AT-Rich Interaction Domain [2], and also known as the BRIGHT domain [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 2 1.9e-19 6.7e-16 59.1 0.0 17 89 2 72 1 72 0.94 2 2 4.3 1.5e+04 -2.9 0.0 25 38 206 219 167 220 0.66
Sequence Information
- Coding Sequence
- ATGAGTACGCCCATCAATCGGCTTCCAATCATGGCCAAGTCTGTCCTGGACCTGTACGAGCTCTACAACCTGGTGATAGCGCGCGGAGGCCTCGTCGAGGTGATCAACAAGAAGCTCTGGCAGGAGATCATCAAGGGCCTCCGGTTACCGTCTTCGATCACGTCTGCTGCCTTCACGTTACGCACACAATACATGAAGTACCTGTACGACTACGAGTGCGAAAAGAAGAACCTGTCCACTCGTAGCGAGCTGGATGCAGCCATCGAAGGCAACAAGCGGGAAGGAAGACGCGCCTCGGGACAGTACGACGCACAAGCAGCGCTTGCCATGCCTCCGCTGAACCGCGGCATGCCCGCGTCGCTCGCGCAGCTCTCTCAGCACATGCAGCCGCTCTCGCTCTCGCTCGGAGGGGGGGTGGGGGGAGTACCGCGCCTGCCCCCCCTGCCCCCGCACCCGCCCCACATCAGCCAGCATGATATTGAATATAGAGTCCGCGAGTACATGAAGATGATACAGACGCAGCGGGAGCTTATGAGAAATGGATCAGAATCTCCACCCAGTGCCACGAACGGTCCCACTCCCATGATGTCTCCGCGCGACGCGGCCGCTCTTAGCGCAATCGACGTCTCACGCCTCACGCTTTGGTCACTCTACAACAATAACAATAACAACAGCCCGGCGCCAACAGACCTTGAACCACAACGAGAGGCGCTCAACCTGAGTGAAAGCCCGAACTCCAGCACCAGCATCAAACGCGAGGCGTGCCGTTCGCCCCCGCCCCCCGCGAAGCGCCGCACACCACGTCCGCCTTCGCCGCGTCTCCCCTCGCCGCCGAGACAGGCGTGTGCGCCACCGCAGACGCAACTCAATGGCACACAGAATGCAGTCAATGGGGCAGCTTTTAAAATCACTACGAGAGGTGATGCCAACACTGGTGACCAACAACTCGTCGTTTCAATAGAACTGAATGGCGTCACATACGAAGGCGTTCTTTTCCCCTCACAAAACGGCAACGGACAAAACGGCCATCGGCAAATGGTATCTTAA
- Protein Sequence
- MSTPINRLPIMAKSVLDLYELYNLVIARGGLVEVINKKLWQEIIKGLRLPSSITSAAFTLRTQYMKYLYDYECEKKNLSTRSELDAAIEGNKREGRRASGQYDAQAALAMPPLNRGMPASLAQLSQHMQPLSLSLGGGVGGVPRLPPLPPHPPHISQHDIEYRVREYMKMIQTQRELMRNGSESPPSATNGPTPMMSPRDAAALSAIDVSRLTLWSLYNNNNNNSPAPTDLEPQREALNLSESPNSSTSIKREACRSPPPPAKRRTPRPPSPRLPSPPRQACAPPQTQLNGTQNAVNGAAFKITTRGDANTGDQQLVVSIELNGVTYEGVLFPSQNGNGQNGHRQMVS
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_00142878;
- 90% Identity
- iTF_00638435;
- 80% Identity
- -