Esub003370.2
Basic Information
- Insect
- Eupithecia subumbrata
- Gene Symbol
- retn
- Assembly
- GCA_949316285.1
- Location
- OX438630.1:2320820-2328933[+]
Transcription Factor Domain
- TF Family
- ARID
- Domain
- ARID domain
- PFAM
- PF01388
- TF Group
- Helix-turn-helix
- Description
- This domain is know as ARID for AT-Rich Interaction Domain [2], and also known as the BRIGHT domain [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 2 1.3e-19 3.6e-16 60.2 0.0 17 89 13 83 9 83 0.95 2 2 6.3 1.8e+04 -2.9 0.0 25 38 217 230 178 232 0.67
Sequence Information
- Coding Sequence
- ATGAAGAGAGCACAAGGAAGCGAGGAGCAGTTAATCGGAACCCCGATAAACCGACTGCCGATAATGGCGAAGTCAGTTCTAGATCTCTACGAGCTGTACAACCTCGTCATCGCCCGTGGAGGTCTCGTGGAGGTCATCAACAAGAAGCTGTGGCAAGAGATCATCAAGGGGCTCCGGCTGCCGTCTTCTATCACGTCTGCGGCCTTCACTTTACGCACACAGTACATGAAATACCTGTACGACTATGAATGTGAGAAGAAGAACCTGTCCACCAGAAGTGAGCTGGACGCTGCCATCGAAGGTAACAAGCGTGAAGGGAGACGCGCTTCGGGCCAGTACGACGCGCAAGCTGCATTGGGCATGCCGCCTATGAACCGCGGGGTGCCTGCCTCGCTCGCACAGCTCTCTCAGCACATGCagcctctctctctctccctcGGAGGGGGAGTGGGGGGTGTCCCACGCCTGCCACCGCTGCCGCCGCACGCGCCGCATATATCGCAGCACGATATAGAGTATAGAGTCAGAGAGTATATGAAGATGATACAGACGCAGCGTGAATTGATGAGGAATGGTTCAGAATCCCCACCCAGCGCAACCAACGGCCCCACACCCATGATGTCACCCCGCGATGCTGCCGCTCTCAGCGCCATCGACGTATCCCGACTGACTCTCTGGTCGCtctacaacaacaacaacaacaatagCCCTGCACCGGACTTGGAGCCACAACGTGAGGCTCTAAACCTCAGCGAGAGCCCCAACTCAAGCACGAGTGGAGGCAAGCGTGAGGCCTGCCGTTCCTCCCCACCCCCTGCTAAGCGCCGCACCCCGCTTCCCCCCTCGCCTCGGCTGCCGTCCCCCCCGAGGCAGGCCTGTGCGCCCGCGCCGGCTGCTATGAATGGGGGGACCACTAATGGATCTAATGGCGCGGCTTTTAAGATTACCACCAGAGgtgaCGCAAACACGGGAGATCAACAGCTGGTTGTGTCAATAGAACTGAACGGCGTCACGTATGAAGGCGTACTGTTCCCCTCACAAAACGGCAACGGACAGAACGGTCACAGGCAAATGGTTTCCTAA
- Protein Sequence
- MKRAQGSEEQLIGTPINRLPIMAKSVLDLYELYNLVIARGGLVEVINKKLWQEIIKGLRLPSSITSAAFTLRTQYMKYLYDYECEKKNLSTRSELDAAIEGNKREGRRASGQYDAQAALGMPPMNRGVPASLAQLSQHMQPLSLSLGGGVGGVPRLPPLPPHAPHISQHDIEYRVREYMKMIQTQRELMRNGSESPPSATNGPTPMMSPRDAAALSAIDVSRLTLWSLYNNNNNNSPAPDLEPQREALNLSESPNSSTSGGKREACRSSPPPAKRRTPLPPSPRLPSPPRQACAPAPAAMNGGTTNGSNGAAFKITTRGDANTGDQQLVVSIELNGVTYEGVLFPSQNGNGQNGHRQMVS
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_00632547;
- 90% Identity
- iTF_00638435;
- 80% Identity
- -