Ecre033455.2
Basic Information
- Insect
- Ectropis crepuscularia
- Gene Symbol
- retn_1
- Assembly
- GCA_963693475.1
- Location
- OY856357.1:19471832-19493573[-]
Transcription Factor Domain
- TF Family
- ARID
- Domain
- ARID domain
- PFAM
- PF01388
- TF Group
- Helix-turn-helix
- Description
- This domain is know as ARID for AT-Rich Interaction Domain [2], and also known as the BRIGHT domain [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 1 4.9e-20 2.1e-16 61.6 0.0 16 89 46 117 41 117 0.95
Sequence Information
- Coding Sequence
- ATGGGATTCGCGACCGCAGAACGCGCATTATCGCGCCCGGAGCCACCGCAGCACCGATTTTCATTCGTGTCTAATAAATTGATACGAGGCGAGCTGCGACGGGAACGCGGCTGCGCCATTGGTCGAGGCGTTCCTCAGGGTACTCCCATAAACCGGCTCCCTATCATGGCTAAGTCGGTTCTCGACCTGTACGAGCTGTACAACCTGGTGATAGCTCGCGGAGGCCTCGTGGAGGTCATCAACAAGAAGCTGTGGCAGGAGATCATCAAGGGGCTCCGGCTACCGTCTTCCATCACGTCTGCTGCCTTCACTTTACGCacacaATACATGAAATACTTGTATGACTACGAGTGTGAGAAGAAAAACTTGTCCACTCGGAGTGAGCTGGACGCCGCCATTGAAGGGAACAAGCGGGAAGGAAGACGGGCCTCGGGCCAGTACGACGCTCAGGCCGCACTTGCTATGCCGGCCCTGAACCGCGGCGTGCCCGCGTCACTTGCGCAGCTCTCTCAGCACATGCAGCCCCTGTCGCTGACGCTGGGAGGGGGTGTGGGGGGCGTCCCCCGCCTGCCCCCGCTgcccccgcacgccccgcataTCAGCCAGCATGACATCGAGTACCGCGTCCGCGAGTATATGAAGATGATACAGACGCAGAGGGAGCTGATGAGGAATGGTTCTGAATCTCCACCGAGCGCGTCGAACGGGCCCGCGCCGATGATGTCGCCCCGCGACGCGGCCGCGCTGAGCGCCATCGACGTGTCGCGTCTCACGCTGTGGTCGCtctacaacaacaacaacaacagccCGGCGCCCGCCGACCTCGAGCCGCAACGAGAGGCGCTGAATCTCAGCGAGAGCCCCAACTCGAGCGGCAGCATCAAGCGCGAAGCGTGCCGCTCGCCCCCGCCCCCCGCCAAGCGCCGCACCCCGCGGCCGCCCTCCCCGCGCCTGCCCTCCCCCCCGCGGCAGGCGTGCGTGCCGCCGGCGCAGACGCAGATCAACGGCACACAGAACGGAGTCAATGGGGCTGCTTTTAAAATTACTACAagagGTGACGCTAACACAGGAGACCAACAGCTCGTCGTTTCGATAGAACTGAACGGAGTAACATACGAAGGAGTACTTTTCCCCTCGCAAAATGGCAACGGACAAAACAACCACCGGCAAATGGTATCTTAA
- Protein Sequence
- MGFATAERALSRPEPPQHRFSFVSNKLIRGELRRERGCAIGRGVPQGTPINRLPIMAKSVLDLYELYNLVIARGGLVEVINKKLWQEIIKGLRLPSSITSAAFTLRTQYMKYLYDYECEKKNLSTRSELDAAIEGNKREGRRASGQYDAQAALAMPALNRGVPASLAQLSQHMQPLSLTLGGGVGGVPRLPPLPPHAPHISQHDIEYRVREYMKMIQTQRELMRNGSESPPSASNGPAPMMSPRDAAALSAIDVSRLTLWSLYNNNNNSPAPADLEPQREALNLSESPNSSGSIKREACRSPPPPAKRRTPRPPSPRLPSPPRQACVPPAQTQINGTQNGVNGAAFKITTRGDANTGDQQLVVSIELNGVTYEGVLFPSQNGNGQNNHRQMVS
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_00142878;
- 90% Identity
- iTF_00638435;
- 80% Identity
- -