Paff020558.1
Basic Information
- Insect
- Perizoma affinitatum
- Gene Symbol
- retn
- Assembly
- GCA_961405105.1
- Location
- OY560206.1:4044405-4050653[-]
Transcription Factor Domain
- TF Family
- ARID
- Domain
- ARID domain
- PFAM
- PF01388
- TF Group
- Helix-turn-helix
- Description
- This domain is know as ARID for AT-Rich Interaction Domain [2], and also known as the BRIGHT domain [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 2 1.7e-19 5.2e-16 59.3 0.0 17 89 8 78 5 78 0.94 2 2 4.4 1.4e+04 -3.0 0.0 25 38 212 225 173 226 0.65
Sequence Information
- Coding Sequence
- ATGCTAGGAGCGATTGAAGGAAGAACTCCAATAAACCGACTGCCGATAATGGCGAAGTCAGTGCTAGACCTCTATGAGTTGTACAACCTGGTGATCGCACGCGGTGGCTTGGTGGAGGTCATCAACAAGAAGCTGTGGCAGGAAATCATCAAGGGGCTTCGATTGCCGTCTTCCATCACATCTGCGGCCTTCACGTTACGCACACAatacatgaAATATCTCTACGATTATGAATGTGAGAAGAAGAACCTGTCCACTAGAAGCGAGTTGGACGCAGCCATTGAAGGCAACAAGCGGGAAGGAAGGCGCGCCTCGGGCCAGTACGATGCGCAGGCAGCTCTTGGCATGCCGCCCCTTAACCGCGGGGTTCCTGCCTCGCTCGCACAGCTCTCCCAGCACATGCAGCCTCTCTCCCTCTCTCTAGGAGGGGGGGTCGCGGGGGTCCCTCGCCTGCCTCCGCTGCCCCCGCACGCGCCGCACATCTCTCAGCACGATATCGAGTACAGAGTCAGAGAGTACATGAAGATGATACAGACGCAACGGGAGCTGATGAGAAATGGTTCAGAATCCCCTCCAAGTGTCACGAACGGCCCAGCCTCCATGATGTCGCCCCGCGACGCGGCCGCATTGAGCGCCATCGACGTGTCCCGCCTGACTCTGTGGTCACTCTACAACAACAATAATAACAACAGCCCGGCGCTGGACCTCGAGCCACAACGTGAGGCACTTAACCTAAGCGAGAGCCCTAACTCTAGCATGAGCGGTGGAAAGCGCGAGGCTTGCCGCTCCCCTCCTCCACCAGCCAAGCGTCGCACCCCCCGACCCCCCTCCCCCCGGCTACCCTCACCTCCGAGACAAGCCTGCGCGCCAGCACCGGCCCAGCTAAACGGAGGGACCCCTAATGGAACAAATGGAGCCGCATTCAAGATCACTACCAGAGgtGATGCAAGCACAGGAGACCAGCAACTCGTCGTGTCAATAGAATTAAATGGCGTCACATATGAAGGCGTCTTATTCCCCTCACAAAACGGCAACGGTCAAAATGGTCACAGGCAAATGGTCTCTTAA
- Protein Sequence
- MLGAIEGRTPINRLPIMAKSVLDLYELYNLVIARGGLVEVINKKLWQEIIKGLRLPSSITSAAFTLRTQYMKYLYDYECEKKNLSTRSELDAAIEGNKREGRRASGQYDAQAALGMPPLNRGVPASLAQLSQHMQPLSLSLGGGVAGVPRLPPLPPHAPHISQHDIEYRVREYMKMIQTQRELMRNGSESPPSVTNGPASMMSPRDAAALSAIDVSRLTLWSLYNNNNNNSPALDLEPQREALNLSESPNSSMSGGKREACRSPPPPAKRRTPRPPSPRLPSPPRQACAPAPAQLNGGTPNGTNGAAFKITTRGDASTGDQQLVVSIELNGVTYEGVLFPSQNGNGQNGHRQMVS
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_00632547;
- 90% Identity
- iTF_00638435;
- 80% Identity
- -