Asyr021282.1
Basic Information
- Insect
- Apeira syringaria
- Gene Symbol
- retn
- Assembly
- GCA_934045895.1
- Location
- CAKOGY010000353.1:1943606-1955349[-]
Transcription Factor Domain
- TF Family
- ARID
- Domain
- ARID domain
- PFAM
- PF01388
- TF Group
- Helix-turn-helix
- Description
- This domain is know as ARID for AT-Rich Interaction Domain [2], and also known as the BRIGHT domain [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 2 1.5e-20 4.2e-17 62.7 0.0 14 89 8 81 2 81 0.93 2 2 4.9 1.3e+04 -3.0 0.0 25 38 215 228 176 229 0.66
Sequence Information
- Coding Sequence
- ATGTCGATCCTCATCTATAAACAGCACGAAGGCACTCCCATCAACCGGCTCCCCATCATGGCCAAGTCGGTACTTGACTTGTACGAGCTGTATAACTTGGTGATTGCCCGAGGAGGTCTCGTGGAGGTCATCAATAAGAAGCTGTGGCAGGAGATCATCAAAGGGCTAAGGCTTCCGTCTTCTATCACGTCTGCGGCCTTTACTTTACGCACCCAATACATGAAGTACCTGTATGACTACGAGTGCGAGAAGAAGAACTTGTCCACCCGTAGTGAGCTCGATGCTGCTATTGAAGGCAACAAACGGGAAGGAAGACGCGCCTCAGGGCAGTACGACGCACAGGCGGCCCTCGCCATGCCGCCGCTGAACCGAGGAGTTCCTGCATCTCTCGCGCAGCTTTCCCAGCACATGCAGCCCCTCTCGCTCTCGCTAGGGGGAGGGGTGGGGGGAGTACCTAGACTGCCTCCCCTCCCCCCGCACGCTCCACATATCAACCAGCATGACATCGAGTATAGAGTTCGGGAATATATGAAGATGATACAGACACAACGAGAGCTTATGAGAAATGGGTCAGAATCCCCACCCAATACCACGAACGGCCCCACACCCATGATGTCACCTCGGGACGCGGCCGCTCTCAGCGCCATCGACGTCTCACGACTCACACTGTGGTCTCTGTATAACAATAACAACAATAATAGCCCAGCGCCGACTGATCTCGAACCGCAACGGGAGGCCCTCAACTTGAGTGAGAGTCCTAACTCGAGTACGAGCGGTGGTGTGAAGCGGGAACCGTGCCGTTCCCCTCCTCCCCCCGCCAAGCGCCGCACCCCGCGGCCCCCCTCCCCCCGCATACCCTCACCACCGAGACAGCTCTGCGCGCCGCCGCAGCAGCAACTCAACGGCACACCCAACGGCGTCAATGGAGCAGCTTTCAAAATCACTACGCGAGGCGATGCAAACACAGGCGACCAGCAGTTGGTAGTTTCAATAGAGCTAAATGGCGTCACGTACGAAGGCGTCCTTTTCCCTTCACAAAATGGCAGCGGACAAAATGGACACCGGCAAATGGTCTCCTAA
- Protein Sequence
- MSILIYKQHEGTPINRLPIMAKSVLDLYELYNLVIARGGLVEVINKKLWQEIIKGLRLPSSITSAAFTLRTQYMKYLYDYECEKKNLSTRSELDAAIEGNKREGRRASGQYDAQAALAMPPLNRGVPASLAQLSQHMQPLSLSLGGGVGGVPRLPPLPPHAPHINQHDIEYRVREYMKMIQTQRELMRNGSESPPNTTNGPTPMMSPRDAAALSAIDVSRLTLWSLYNNNNNNSPAPTDLEPQREALNLSESPNSSTSGGVKREPCRSPPPPAKRRTPRPPSPRIPSPPRQLCAPPQQQLNGTPNGVNGAAFKITTRGDANTGDQQLVVSIELNGVTYEGVLFPSQNGSGQNGHRQMVS
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_00142878;
- 90% Identity
- iTF_00638435;
- 80% Identity
- -