Ecen007306.2
Basic Information
- Insect
- Eupithecia centaureata
- Gene Symbol
- retn
- Assembly
- GCA_944548335.1
- Location
- CALYMU010000323.1:489066-498383[+]
Transcription Factor Domain
- TF Family
- ARID
- Domain
- ARID domain
- PFAM
- PF01388
- TF Group
- Helix-turn-helix
- Description
- This domain is know as ARID for AT-Rich Interaction Domain [2], and also known as the BRIGHT domain [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 2 5.2e-20 1.5e-16 61.3 0.0 15 89 46 118 33 118 0.91 2 2 7.4 2.1e+04 -3.3 0.0 25 38 252 265 215 266 0.69
Sequence Information
- Coding Sequence
- ATGGACATTTCGGCCCGCAGGCTGTATGTGATGTGGGCTGAGTTGACCAAAGAATCGTCAAAACTACTGTTTGACGAATCTCAACCGACTAACTTCAAAGATGAAATGATCCACAGATTTGTTGACATAGACAACGGAACCGGGACTCCAATAAACCGGCTGCCGATAATGGCGAAGTCAGTTCTGGATCTGTACGAGCTGTACAACCTCGTCATCGCCCGCGGCGGGCTGGTAGAGGTCATCAACAAGAAGCTGTGGCAAGAGATCATCAAGGGGCTACGTCTGCCGTCTTCTATCACGTCTGCGGCCTTCACGTTACGCACACAATACATGAAATACCTATACGACTATGAATGTGAGAAGAAGAACCTATCCACGAGGAGTGAGCTGGATGCAGCCATCGAAGGCAACAAGCGTGAAGGAAGGCGTGCTTCGGGCCAGTACGACGCGCAAGCCGCGCTGGGCATGCCGCCCATGAACCGCGGGGTTCCTGCCTCGCTCGCACAGCTCTCCCAGCACATGCAGCCTCTCTCTCTCTCCCTGGGAGGGGGAGTGGGGGGAGTCCCCCGCCTGCCACCTCTGCCGCCGCATGCGCCGCATATATCGCAGCACGATATAGAGTACAGAGTCAGAGAGTATATGAAGATGATACAGACTCAGCGTGAATTGATGAGGAATGGTTCAGAATCCCCACCGAGCGCTACCAACGGCCCAACTCCCATGATGTCTCCCCGGGATGCCGCCGCTCTCAGCGCCATCGACGTGTCTCGCCTGACTCTATGGTCGCTCTACAACAACAATAACAACAACAGTCCTGCGCCTGACCTGGAGCCTCAACGTGAGGCTCTAAACCTCAGCGAGAGTCCCAACTCGAGCACGAGTGGTGGTAAACGTGAGGCCTGCCGCTCCCCCCCGCCCCCGGCTAAGCGCCGCACCCCCCTTCCCCCCTCGCCGCGGCTGCCTTCCCCCCCCAGGCAGGCCTGTGCGCCCGCGCCGGCTGCCATGAATGGTACCACTAATGGAACTAATGGCGCGGCTTTTAAGATTACCACCAGAGGTGACGCAAACACGGGAGATCAACAGCTAGTTGTTTCAATAGAACTGAATGGCATTACGTATGAAGGCGTGTTATTCCCTTCACAAAACGGCAATGGACAGAACGGtcacaggcaaatggtttcctAA
- Protein Sequence
- MDISARRLYVMWAELTKESSKLLFDESQPTNFKDEMIHRFVDIDNGTGTPINRLPIMAKSVLDLYELYNLVIARGGLVEVINKKLWQEIIKGLRLPSSITSAAFTLRTQYMKYLYDYECEKKNLSTRSELDAAIEGNKREGRRASGQYDAQAALGMPPMNRGVPASLAQLSQHMQPLSLSLGGGVGGVPRLPPLPPHAPHISQHDIEYRVREYMKMIQTQRELMRNGSESPPSATNGPTPMMSPRDAAALSAIDVSRLTLWSLYNNNNNNSPAPDLEPQREALNLSESPNSSTSGGKREACRSPPPPAKRRTPLPPSPRLPSPPRQACAPAPAAMNGTTNGTNGAAFKITTRGDANTGDQQLVVSIELNGITYEGVLFPSQNGNGQNGHRQMVS
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_00632547;
- 90% Identity
- iTF_00638435;
- 80% Identity
- -