Gpyr004755.1
Basic Information
- Insect
- Gandaritis pyraliata
- Gene Symbol
- retn
- Assembly
- GCA_947859175.1
- Location
- OX401868.1:3251295-3256875[-]
Transcription Factor Domain
- TF Family
- ARID
- Domain
- ARID domain
- PFAM
- PF01388
- TF Group
- Helix-turn-helix
- Description
- This domain is know as ARID for AT-Rich Interaction Domain [2], and also known as the BRIGHT domain [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 2 2.3e-21 6.8e-18 65.1 0.0 9 89 5 83 3 83 0.94 2 2 4.4 1.3e+04 -3.2 0.0 25 38 217 230 180 231 0.70
Sequence Information
- Coding Sequence
- ATGGGGGAGACCTTTGCCCAGCAGTGGGAAAGTACAGGAACCCCAATAAACCGGCTGCCGATAATGGCCAAGTCCGTGCTAGACCTTTACGAGCTGTACAACCTGGTGATCGCTCGCGGCGGCCTGGTCGAGGTGATCAACAAGAAGCTGTGGCAGGAGATCATCAAAGGACTCCGGCTTCCGTCTTCTATCACTTCTGCGGCTTTCACTTTACGCACGCAATACATGAAATATCTCTACGACTATGAGTGTGAGAAGAAGAACCTCTCTACACGAAGTGAGTTGGACGCCGCCATTGAAGGAAACAAGCGGGAAGGAAGACGTGCTTCGGGCCAGTACGACGCGCAAGCAGCTCTTGGCATGCCGCCTCTGAACCGCGGGGTCCCCGCGTCTCTAGCCCAGCTCTCCCAGCACATGCAGCCACTTTCCCTCTCCCTAGGCGGGGGGGTCGCAGGGGTCCCACGTTTACCCCCCTTACCCCCTCACGCGCCGCATATATCCCAGCACGACATCGAGTATAGAGTAAGGGAGTACATGAAGATGATACAAACGCAACGGGAGCTGATGAGGAATGGTTCAGAATCCCCGCCCAGCGCGAGCAACGGCCCAGCATCAATGATGTCACCTCGTGACGCCGCCGCCCTGAGCGCCATCGACGTGTCCCGCCTCACTCTGTGGTCGCTTTACAACAATAACAATAACAACAGCCCTGCGCCAGACTTGGAGCCACAACGTGAGGCACTCAATCTCAGTGAGAGTCCGAACTCCAGCACGAGCGGTGGAAAGCGCGAGGCTTGCCGCTCCCCCCCGCCCCCGGCGAAGCGTCGCACCCCCCGACCACCCTCACCACGGCTACCCTCCCCCCCGCGGCAAGCCTGCGCGCCCGCACCCGCTCAGCTGAACGGAGGTACCACTAATGGAACAAATGGAGCAGCTTTCAAAATTACCACCAGAGGTGACGCAAACACAGGAGACCAACAACTCGTCGTATCAATAGAATTAAACGGAGTCACATATGAAGGTGTCTTATTCCCCTCACAGAATGGCAACGGTCAAAACAATCACAGGCAAATGGTCTCTTAA
- Protein Sequence
- MGETFAQQWESTGTPINRLPIMAKSVLDLYELYNLVIARGGLVEVINKKLWQEIIKGLRLPSSITSAAFTLRTQYMKYLYDYECEKKNLSTRSELDAAIEGNKREGRRASGQYDAQAALGMPPLNRGVPASLAQLSQHMQPLSLSLGGGVAGVPRLPPLPPHAPHISQHDIEYRVREYMKMIQTQRELMRNGSESPPSASNGPASMMSPRDAAALSAIDVSRLTLWSLYNNNNNNSPAPDLEPQREALNLSESPNSSTSGGKREACRSPPPPAKRRTPRPPSPRLPSPPRQACAPAPAQLNGGTTNGTNGAAFKITTRGDANTGDQQLVVSIELNGVTYEGVLFPSQNGNGQNNHRQMVS
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_00632547;
- 90% Identity
- iTF_00638435;
- 80% Identity
- -