Ahis005453.1
Basic Information
- Insect
- Apocheima hispidaria
- Gene Symbol
- retn
- Assembly
- GCA_947579745.1
- Location
- OX388163.1:4095106-4104092[+]
Transcription Factor Domain
- TF Family
- ARID
- Domain
- ARID domain
- PFAM
- PF01388
- TF Group
- Helix-turn-helix
- Description
- This domain is know as ARID for AT-Rich Interaction Domain [2], and also known as the BRIGHT domain [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 2 5.6e-20 1.3e-16 61.0 0.0 16 89 7 78 6 78 0.95 2 2 4.9 1.1e+04 -3.0 0.0 25 38 212 225 173 226 0.66
Sequence Information
- Coding Sequence
- ATGCCCAATGAACCTTATAAAGGCACTCCCATTAACCGGCTGCCCATCATGGCTAAGTCTGTCCTGGACTTGTACGAGCTGTACAACCTGGTGATTGCGCGCGGAGGCCTCGTGGAGGTCATCAACAAGAAACTCTGGCAGGAGATCATCAAAGGTCTCCGGCTCCCGTCTTCAATCACGTCTGCTGCCTTCACGTTACGCACACAGTACATGAAGTATCTGTACGACTACGAGTGCGAGAAGAAGAACTTGTCCACTCGGAGCGAGCTGGATGCAGCTATTGAAGGCAACAAACGGGAGGGAAGACGCGCCTCGGGGCAGTACGATGCACAAGCAGCTCTTGCAATGCCGCCCCTGAATCGCGGGATGCCAGCGTCTCTCGCGCAGCTCTCTCAGCACATGCAGCCGCTCTCGCTGTCCCTCGGAGGAGGTGTGGGGGGCGTACCCAGGCTGCCCCCCTTACCCCCACATGCACCGCACATTAGCCAGCACGATATAGAATACAGAGTCCGCGAATACATGAAGATGATACAGACGCAACGGGAGCTTATGAGAAATGGATCGGAATCCCCACCCAGTGCCACGAACGGTCCTACACCCATGATGTCTCCACGCGACGCAGCCGCCCTGAGTGCGATCGACGTCTCGCGCTTGACGCTGTGGTCACTCTACAACAACAACAACAACAACAGTCCCGCGCCAACAGACCTGGAGCCGCAACGAGAGGCGCTCAACCTGAGTGAAAGCCCGAACTCCAGCACCAGTATCAAGCGCGAGGCGTGCCGCTCGCCCCCGCCCCCCGCGAAGCGCCGCACCCCGCGCCCGGCCTCGCCGCGTCTCCCCTCGCCGCCGCGACAGGTGTGCGCGCCGGCTCAACCTCAGACGCAGCTAAACGGCACGCAGAATGGAGTCAATGGAGCAGCATTTAAGATCACTACCAGAGGTGATGCTCATACAGGGGACCAACAACTCGTCGTGTCAATAGAACTTAACGGCGTCACGTACGAGGGCGTCCTGTTCCCCTCGCAAAACGGGAACGGACAAAACGGCCATCGGCAAATGGTCTCTTAA
- Protein Sequence
- MPNEPYKGTPINRLPIMAKSVLDLYELYNLVIARGGLVEVINKKLWQEIIKGLRLPSSITSAAFTLRTQYMKYLYDYECEKKNLSTRSELDAAIEGNKREGRRASGQYDAQAALAMPPLNRGMPASLAQLSQHMQPLSLSLGGGVGGVPRLPPLPPHAPHISQHDIEYRVREYMKMIQTQRELMRNGSESPPSATNGPTPMMSPRDAAALSAIDVSRLTLWSLYNNNNNNSPAPTDLEPQREALNLSESPNSSTSIKREACRSPPPPAKRRTPRPASPRLPSPPRQVCAPAQPQTQLNGTQNGVNGAAFKITTRGDAHTGDQQLVVSIELNGVTYEGVLFPSQNGNGQNGHRQMVS
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_00926375; iTF_00790026; iTF_00913394; iTF_01172114; iTF_00825367; iTF_00826607; iTF_00923395; iTF_00055185; iTF_00124951; iTF_01207896; iTF_00895705; iTF_00044244; iTF_00666293; iTF_00206779; iTF_00649808; iTF_00634097; iTF_00205844; iTF_00648893;
- 90% Identity
- iTF_00638435;
- 80% Identity
- -