Pdol038893.2
Basic Information
- Insect
- Plagodis dolabraria
- Gene Symbol
- retn
- Assembly
- GCA_963854805.1
- Location
- OY978458.1:10748579-10758407[-]
Transcription Factor Domain
- TF Family
- ARID
- Domain
- ARID domain
- PFAM
- PF01388
- TF Group
- Helix-turn-helix
- Description
- This domain is know as ARID for AT-Rich Interaction Domain [2], and also known as the BRIGHT domain [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 2 1.2e-20 7.4e-17 63.3 0.0 13 89 3 77 1 77 0.94 2 2 4.9 3.1e+04 -2.8 0.0 25 38 211 224 171 225 0.61
Sequence Information
- Coding Sequence
- ATGTACCAAAAAACGAACGGCACACCCATCAACCGGCTCCCGATCATGGCAAAGTCAGTCCTCGACCTATACGAGCTGTACAATCTGGTGATCGCCCGTGGTGGCCTCGTCGAGGTCATCAACAAGAAGCTGTGGCAGGAAATCATCAAGGGGCTGAGGCTGCCGTCTTCTATCACGTCTGCGGCCTTCACTTTACGCACACAGTATATGAAGTACCTGTATGACTACGAGTGTGAGAAGAAAAATCTGTCCACCCGTAGCGAGCTGGACGCTGCTATTGAAGGCAACAAGCGGGAAGGAAGACGTGCATCAGGGCAGTATGATGCTCAAGCGGCGCTTGCGATGCCGCCGTTGAACCGAGGAGTGCCAGCGTCTCTTGCGCAGCTGTCTCAGCACATGCAGCCCCTCTCGCTCTCTCTCGGAGGAGGTGTGGGGGGAGTGCCGAGGCTGCCCCCTCTCCCGCCGCATGCTCCACACATCAGTCAACACGATATCGAGTATAGAGTTCGGGAGTATATGAAGATGATACAGACGCAGAGGGAGCTTATGAGAAATGGATCAGAATCCCCACCCAGTGTCACAAACGGTCCTACCCCCATGATGTCACCTCGAGACGCAGCCGCACTGAGCGCCATCGACGTGTCGCGGTTGACACTCTGGTCCCTCTACAACAACAACAATAACAACAGTCCAGCGCCGACCGATCTCGAGCCACAACGGGAGGCCCTCAACCTGAGCGAGAGCCCGAACTCGAGCGCAAGCGGAGGTGTGAAGCGCGAGCCATGCCGTTCCCCTCCGCCCCCCGCCAAGCGCCGCACCCCTCGCCCGCCCTCCCCGCGCCTGCCCTCCCCCCCACGGCAGGTCTGCGCGCCCCCACAGCCTCAGCTCAACGGCACACCCAACGGCGTCAATGGAGCAGCATTCAAAATCACTACAAGAGGTGATGCAAACACTGGCGACCAGCAGCTGGTAGTTTCAATAGAACTGAACGGTGTCACGTATGAAGGCGTTCTCTTCCCCTCACAAAACGGCAATGGACAAAATGGCCACCGGCAAATGGTCtcctaa
- Protein Sequence
- MYQKTNGTPINRLPIMAKSVLDLYELYNLVIARGGLVEVINKKLWQEIIKGLRLPSSITSAAFTLRTQYMKYLYDYECEKKNLSTRSELDAAIEGNKREGRRASGQYDAQAALAMPPLNRGVPASLAQLSQHMQPLSLSLGGGVGGVPRLPPLPPHAPHISQHDIEYRVREYMKMIQTQRELMRNGSESPPSVTNGPTPMMSPRDAAALSAIDVSRLTLWSLYNNNNNNSPAPTDLEPQREALNLSESPNSSASGGVKREPCRSPPPPAKRRTPRPPSPRLPSPPRQVCAPPQPQLNGTPNGVNGAAFKITTRGDANTGDQQLVVSIELNGVTYEGVLFPSQNGNGQNGHRQMVS
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_00142878;
- 90% Identity
- iTF_00638435;
- 80% Identity
- iTF_01208989;