Danc003882.1


Basic Information
Transcription Factor Domain
Sequence Information
Similer Transcription Factors

Basic Information

Insect
Drosophila anceps
Gene Symbol
sip1
Assembly
GCA_035045945.1
Location
JAWNON010000062.1:4115386-4118420[+]

Transcription Factor Domain

TF Family
GCFC
Domain
GCFC domain
PFAM
PF07842
TF Group
Unclassified Structure
Description
This entry describes a domain found in a number of GC-rich sequence DNA-binding factor proteins and homologues [4, 5], as well as in a number of other proteins including Tuftelin-interacting protein 11 [1]. While the function of the domain is unknown, some of the proteins it is found in are reported to be involved in pre-mRNA splicing [1, 2]. This domain is also found in Sip1, a septin interacting protein [3].
Hmmscan Out
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc
1 2 3.1e-95 1.4e-91 306.9 14.8 2 275 425 695 424 695 0.97
2 2 0.075 3.4e+02 0.6 0.1 157 202 707 749 700 750 0.71

Sequence Information

Coding Sequence
ATGTCTGACAATGAGTACGAACGCTTCGAGATCACAGACTATGATTTGGACAATGAGTTTAACATAAACAGGCCACGCAGACGCCACACCAAGCATCAGCAAATTTATGgCATTTGGGCTGATGACAGTGACAATGAGGGCGAAGGCGAAAGCAGTGGACGACGCGGCAGACGTGGCTTGGGCGGCGGCTCAAGCAGCAAGCCCAAGGATTACACTGCCCCAGTGAATTTCGTAGCCGGCGGCATTCAGCAGGCCGGCAAAAAGCCGAAAAAGAATCAGCTACAAGATGAGAAAGCAGGTAGCGACGATGACGGCAGCGATGCGGATGACAGCGACGAAGCGCGACCATCATTCGGACGCAAACAGCCACAGCTGATGGACAACAGCGATGCCAACAGCTCGGACAGCTCTGCGGCCCAAGAGGAGCAGCCGCAACGCCCAAGAATGTCATCGAACAACACCGCGGGATTGCGACACAAGTCGCACCTAGCAAGCAATAGGAATGTGGGTGCCTGGGAGCAGCATACACGCGGCATAGGTGccaagctgctgttgcagatgGGCTACGAGCCCGGCAAGGGTCTGGGCAAGGACTTGCAGGGCATCGCGCAGCCGGTGCAGGCGCATGTGCGCAAAGGACGCGGCGCCATCGGTGCCTATGGCCCAGAGACGGCAGCTAGTATTGGCGGCCAGCCCAAACCGCTAAAAGCAGATGACGATGGCAAGGCGCCCAAAGAGTTTAAGGAGCAACACAAGTGGAAGAAAGGCGGCGGCGAGGCACGCGAAAAGCATGTCAAACGCTACTACTACAAGACCGTGGAGGAGGTCATTGCCAAGGGCAAGAAGTCGGATCATTTGCTCTCAGAAAAGCTGAGCAAGCGCCTGGGCAATGTTCCAGTAATCGACATGACCGGACCGGAGCGTCGCGTACTGAGTGGCTATCACGCCTTGGCCCAGAACAAAGTAACGCCCGAGGAGACACTGTACGATGATGCACAGCCTGGCGATGAGAATGTGGAGAAGGCGACCCCTGTCTCGGTGTTTAGCATGCCGGAGCTGACGCACaatctgcagctgctggtgaGCCAATGCGAACAGGATATCATCGCCATAGACAAGGACGAGCGCGAATGCAGCGATCGTCAGGCAGCGCTGGTGCACGAACAGAAGCAGTTGCTGGAGCTGGTGCAGCTGGAGCGCAATCACATGAACACGCTGGAGGCGGCGCTAACGCGTCTCGAGCAGCTCAGCGAGAATCCAGACCTGAGTCTCGCGCAAGCCGAACGCCTATTTCTGGAGCTGCAGCATGACTATGCGGCCGAGTACAAGGAGTTCGGGCTGGCCGATCTGGCGGCAGGCGTCATTGCGCCGCTCCTGAAGCGCGAGCTAAACGACTGGCAGCCATTGCAGCAGCCCacgcagccgctgcagctgatCAAGCGCTGGCATGGCATACTGCAGCAGGATGAGATCGAGCTAACGGATCAGCAGTCACGCAACGTATTCGATCCGTACTCGTCACTCATCTGGGCTGGCGTAATGCCCTCGTTTCGAGCCTGCGCCGCCAGCTGGCAGCCGAAGGAGCATGCGTCAATGGCAGCGTTGCTCGATGCTTGGGCGCCACTGTTGCCCACCTGGGTGCTGGACTCGGTGCTGGAGCAGTTGGTGCTGCCACGGCTCACGGCTGGCGTACGCGACTGGGATCCCCTGACCGATACTGTGCCCATACACAGCTGGATATTGCCCTGGCATGGCATACTGGGCCCCAAGCTGGAGGAGTCCATCTATCCGCAGATACGTTGCAaactgggcgtggcactgcAGGCCTGGTCACCGCAGGATCGTTCAGCGCGTGCCATGCTCACGCCCTGGCAGTCCGCATTTCCGGAGGAGCAACTGGTGCAGTTTCTGCTGCGCTACATCATACCCAAGCTGCAGGCGGTGCTGGCGGAATTTGTCATCAATCCGCTGCAACAGAACCTGGAGCTGTGGCATCAGGTGTGGGAGTGGCACGAGCTAATACCCGCCCAGCACATGGCCCAGCTGCTGGACAAGCACTTCTTTCCACGCTGGATGCAAGTGCTGGTCATCTGGCTCAATCAGTCGCCGGACTTTGCGGAGATTTCGCGCTGGTATGCCGGCTGGAAGAGCATGCTGAGCGAATCGATACTGCGTGAGCCCAGCATCAAAGAGCATCTGCGTCGCGCCTTGGACATGCTGCATCGTGCCACGGATGCCGTGCTGCAGCCCACATCTGCCCCGCCACCGCCTATGCCGCCGGCGCCTGCGCCCGTCTTGCTGACGCCCGTGATGCTTGTCGATGTGGCGCCACCCGCTCAGCTGGAGTTCAAAGAGCTCGTCTCGCAGAAATGCGCTGAGCTGGGCATCATCTTTGCGCCGCTGCCTGGCCGACGCGAACTGGGCAAACAGatctACCGCGTGGGAAAGCTCTTTTGCTATATCGATCGGAACGTTTGCATGCTGAGCGATATCAGCTTTACGAATTGGCAGCCGGTGGGATTGAGTCAGCTGCTGGAACGTGCGCAGACGGGCATCATCTAG
Protein Sequence
MSDNEYERFEITDYDLDNEFNINRPRRRHTKHQQIYGIWADDSDNEGEGESSGRRGRRGLGGGSSSKPKDYTAPVNFVAGGIQQAGKKPKKNQLQDEKAGSDDDGSDADDSDEARPSFGRKQPQLMDNSDANSSDSSAAQEEQPQRPRMSSNNTAGLRHKSHLASNRNVGAWEQHTRGIGAKLLLQMGYEPGKGLGKDLQGIAQPVQAHVRKGRGAIGAYGPETAASIGGQPKPLKADDDGKAPKEFKEQHKWKKGGGEAREKHVKRYYYKTVEEVIAKGKKSDHLLSEKLSKRLGNVPVIDMTGPERRVLSGYHALAQNKVTPEETLYDDAQPGDENVEKATPVSVFSMPELTHNLQLLVSQCEQDIIAIDKDERECSDRQAALVHEQKQLLELVQLERNHMNTLEAALTRLEQLSENPDLSLAQAERLFLELQHDYAAEYKEFGLADLAAGVIAPLLKRELNDWQPLQQPTQPLQLIKRWHGILQQDEIELTDQQSRNVFDPYSSLIWAGVMPSFRACAASWQPKEHASMAALLDAWAPLLPTWVLDSVLEQLVLPRLTAGVRDWDPLTDTVPIHSWILPWHGILGPKLEESIYPQIRCKLGVALQAWSPQDRSARAMLTPWQSAFPEEQLVQFLLRYIIPKLQAVLAEFVINPLQQNLELWHQVWEWHELIPAQHMAQLLDKHFFPRWMQVLVIWLNQSPDFAEISRWYAGWKSMLSESILREPSIKEHLRRALDMLHRATDAVLQPTSAPPPPMPPAPAPVLLTPVMLVDVAPPAQLEFKELVSQKCAELGIIFAPLPGRRELGKQIYRVGKLFCYIDRNVCMLSDISFTNWQPVGLSQLLERAQTGII